 |
Information for unigene UN14105
| FASTA Sequence |
| Unigene ID: UN14105 | Length: 850 |
SSR | | GGACAGTAGATGCGAAAAAGCAGTCGTCTCTCTCTCTCTCTCTCAGGAGACACACCAGATTAAACCAAACCAGAAATCTGGAGAAT
CCTCCCTTCCTTCTTCCCCCGAAAAGAGAGAGTTTTGCGAATCAGGCGAAAGTAGTAGAAGAAAGGGAGAAACGAATAAGATCGGA
TCGGATCGGGATAGATGGCGAATCTGTATGTGAAAGCGGCACCACCGCCGGACATGAACAGGAACACGGAGTGGTTCATGTATCCA
GGGGTGTGGACGACTTATATACTAATCCTCTTCTTCGGGTGGCTCGTTGTTCTCTCCATCTCTGGCTGTTCCCCTGGAATGGCTTG
GACTGTTGTTAATCTCGCTCACTTCGTTGTAACTTATCACTCCTTTCACTGGATGAAAGGAACTCCTTTTGCAGACGACCAAGGTG
TCTACAATGCTCTCACCTGGTGGGAACAGATGGACAATGGTCAGCAACTTACCCGCAACCGCAAGTTCCTTACCGTTGTTCCTGTC
GTCCTGTACTTGATAGCATCACATACAACAGATTACAGACATCCATGGCTATTCCTCAACACACTCGCTGTGATGGTTCTAGTTGT
GGCCAAGTTCCCTAACATGCACAAGGTACGCATCTTCGGGATCAACGGTGATAAGTAAAGCTTCTTTAGCACACTCTCAGATCCAT
TTCTTTTTATGGCAACAGAAAAAGTGGATATGAAGCAAAACATATTTGTATAAAATGTTGATATGAGTTGGTTTTGAGTTGTCGGA
TATTTTGTAAGTAACTTTGAAGCTTTGAATTTCTTCTCTCTTTTTAAAAAAACATAGACACGAAATTGATAATTTC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002892079 ORMDL family protein [Arabidopsis lyrata subsp. lyrata] | 855 | 1e-089 |
| NP_563622 ORMDL-like protein [Arabidopsis thaliana] | 852 | 3e-089 |
| AAF97341 Unknown protein [Arabidopsis thaliana] | 800 | 3e-083 |
| XP_002523307 ormdl, putative [Ricinus communis] | 761 | 1e-078 |
| XP_002266406 PREDICTED: hypothetical protein [Vitis vinifera] | 756 | 4e-078 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9CPZ6 ORM1-like protein 3 | 308 | 2e-027 |
| Q6QI25 ORM1-like protein 3 | 306 | 3e-027 |
| Q0VD15 ORM1-like protein 3 | 305 | 4e-027 |
| Q8N138 ORM1-like protein 3 | 305 | 4e-027 |
| Q5R570 ORM1-like protein 3 | 304 | 5e-027 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9C5I0 Putative uncharacterized protein At1g01230 | 852 | 2e-089 |
| Q9LNJ8 F6F3.4 protein | 800 | 2e-083 |
| B9SBD8 Ormdl, putative | 761 | 7e-079 |
| A5C166 Putative uncharacterized protein | 756 | 3e-078 |
| A9P8F2 Predicted protein | 756 | 3e-078 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
