 |
Information for unigene UN14107
| FASTA Sequence |
| Unigene ID: UN14107 | Length: 1531 |
| SNP | CGGAAAAAAATAATAATATTCAATTGAGAAATGTTTTGATAAGTTACAAAAAAATAGAGACAAACACCAAATGACTAACAAGATAG
ATATACATCATTTTGTTTATACTTTTATTCAAAGCCAAAGAAGAATAACAGAAAGCAACAAAGTTTGAGAGAGATAAAATACACAA
AAAACAAAAAAAGAAGATCCCACATAAGATAATCACATAACTATCTCTGGCTTCAAGATGTTGGATTTGATCTCCTTGTGTGGCAA
AACAACCCCTCCATTGGTGTATATCTCATCCCCAACATGAACATCTTCCCCCAAGATCGTCATGTTCTCAATCCTAGCCCACTGCC
CAACCGTTGAGTGCCACCCTACGATACTGCTCGAGACACACGCATGCTTCTTAATCCTTGCCCCACGCATGACCGTGCACCGTGAA
AGCCTCACCCCTGACTCAACAACGCATCCTGGACCAATGGCCACGTCTGGTCCTATCAAACACCCTTCCCCAATCTTAGCGGTTTC
ATCCACCAGAACATTCCCAACGATGTGTGCACCAGTGGTTAGCTTGGCAGGAGATTTCTTCCTCAGAGAGTCTAAGTAGAGTCTCA
GGCCGGTTATGTAGTCCTTGGGTTGTCCAATGTCCATCCAGAATCCAGGTAGCACCATGGCGTAGAGCCCTTGAGCTGCTGCAATC
TTGGGGAAGGTCTCTTTCTCGATCGATGTTGGTCTTAGCTCAATCTTGTCGAGAACCGATGGGTTTAGAAGGTAGATCCCAGCGTT
GATCTTGTTGCCTACAAACAGTTTTGGCTTCTCCACAAACTTCTCAACTTTTCCTGTAGTTTCATCCATGACAACAACTCCATACT
TGGACGGTTCATCAACCTTTGTCACCATAATGGAGGCTTCACCACCGTGAGCTTTGTGAAACTCAATCATCTCTTTGAGAGGGTAC
TCACTGATCACATCACTGTTGAGGACAAAGAAGGGCTCTCCAGATCCATCAACCAGTTTGTCTCTAGCTAGAGCCAGAGGACCAGC
CGTACCCATAGGCTCAGTCTCTTGTGAGCAAGTGATTTTGATTTCGAGCTTTGCCTCAAAGTCTTTCAAGAAGTTAAGCATCACCT
CTGGTTGGTAATTGATGGCCAAAACCACTTCGTCAACTCCAACTGCCTTGAGTGCCTCTATCTGATGAAGGATCATGGGTTTGTTA
GCAAAGTCAACAAGGGGCTTTGGGAAACTGAGAGTCAACGGTCTCAAGCGAGTCCCGAACCCACCGACAAGAATGAGAGCCTTCAT
CTTCTAGGACTCAAACTACACTCTTTCAATTCCTTTTGCCTGAAATTCAGTTGCTTGATTAGACAATTCAACACAAACCCCAACAG
CTGTCAAAAATGTTTGAATCACGTCATTAACATAATCAAAAATCTCAGCTTAAATCCAGATCGGTCACCAGTATATTCAAGATTTA
AACCCAAATAAATGAATCCGCAAAAACCCACAAGAATTCAAATCAAACTCAAAGAAAGGACATGCAACC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34137 unnamed protein product [Thellungiella halophila] | 1829 | 4e-202 |
| XP_002879816 hypothetical protein ARALYDRAFT_483004 [Arabidopsis lyrata subsp. lyrata] | 1798 | 1e-198 |
| NP_181507 mannose-1-phosphate guanylyltransferase [Arabidopsis thaliana] | 1793 | 6e-198 |
| CAC35355 GDP-mannose pyrophosphorylase [Arabidopsis thaliana] | 1782 | 1e-196 |
| ABB53473 GDP-mannose pyrophosphorylase [Malpighia glabra] | 1720 | 2e-189 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q54K39 Mannose-1-phosphate guanyltransferase beta | 1219 | 8e-133 |
| Q68EY9 Mannose-1-phosphate guanyltransferase beta-A | 1182 | 2e-128 |
| Q9Y5P6 Mannose-1-phosphate guanyltransferase beta | 1182 | 2e-128 |
| Q2YDJ9 Mannose-1-phosphate guanyltransferase beta | 1180 | 3e-128 |
| Q68EQ1 Mannose-1-phosphate guanyltransferase beta | 1179 | 4e-128 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O22287 At2g39770/T5I7.7 | 1793 | 4e-198 |
| Q9C5B8 GDP-mannose pyrophosphorylase | 1782 | 7e-197 |
| A0EJL9 GDP-mannose pyrophosphorylase | 1720 | 1e-189 |
| C0KWD9 GDP-D-mannose pyrophosphorylase | 1714 | 6e-189 |
| B9HT64 Predicted protein | 1711 | 1e-188 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G39770.1 CYT1 (CYTOKINESIS DEFECTIVE 1); mannose-1-phosphate guanylyltransferase/ nucleotidyltransferase | 1794 | 2e-200 |
| AT3G55590.1 GDP-mannose pyrophosphorylase, putative | 1607 | 8e-179 |
| AT4G30570.1 GDP-mannose pyrophosphorylase, putative | 1284 | 2e-141 |
| AT1G74910.1 ADP-glucose pyrophosphorylase family protein | 313 | 8e-029 |
| AT1G74910.3 ADP-glucose pyrophosphorylase family protein | 313 | 8e-029 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
