Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN14128

FASTA Sequence
Unigene ID: UN14128Length: 940  SNP
GAACACGACTTTAAAGACGAAGAAAGCAAATCGAAACTGGAGAAGACATATCGACGAGTTCCAAGAGAATGACCATGGATAAGGTG
GAAGAGGAGCCACGAGCTCCCGTCGAAGGTGGATGCGGTTTTGGCGGCGATAACGTCACTGTACATGGTTCCATCGCCGGATCTGT
CGCCGGAGAAGGTGCTGAGAAACCAATTCACGAAGCTAGGTGCATGGAAGTCCCTTCCTCTGAGCCAGAAGCTCCAACCATCCGTC
CTAATCAACTTACTATCTTCTTTGGTGGGAAAGTTCGCGTCTTTGATGGGATTCCAGCAGACAAGATTCAAGAAATCATCCGTATT
GCTGCTGCTACTGCTGCTCAATCCATTGAGACAAAGAACTCCACGAACACCAGTCCTGTCGCTTCTCCAGCACTGAACAGAGCTCC
TTCTCTCTCAAGCACCTCCAATGCAGCTTCCCCAGCTGCGCAGTCATTCCCCGTTCACCCTATTTCCTTCTGCAGATCTGCTGCTG
ATCTACCAATTGCAAGGAGGCATTCGCTTCAACGATTCCTTGAGAAGAGACGGGACAGATTGGTCAGCAAGAATCCTTACCCTGCT
TCAGACAAGAAGACAGATGTCCCAAGAGACGATGCTTCTGTTAAGGAGGAGTATCCCACTGCTTAGCAGAAGATCAACCAACCTTC
AAGGCTGTAATAAAGTTTAACGAATATATCATTCCCCTACTAAGTGAAACGTTATGAACTTATGATAATGTAATCGTCTATGCTGC
TTCTGTGTTGTATGATAGTGTCTGTACAGGTTTGTTAGACCTGTTTTATCATTTTACGTTTTTCTCCAAGGATTGTTATTGCAGTG
TCCTAAGAGTCTATCTTAACTAATGTCTCATGGTGTTATGTTATTGAACTCATTTAATGGAATCTAAATGTTATTGTTGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34102 unnamed protein product [Thellungiella halophila]6671e-067
NP_197590 protein TIFY 3B [Arabidopsis thaliana]6061e-060
XP_002871960 hypothetical protein ARALYDRAFT_488996 [Arabidopsis lyrata subsp. lyrata]5801e-057
XP_002308503 predicted protein [Populus trichocarpa]3255e-028
XP_002324786 predicted protein [Populus trichocarpa]2923e-024

Swiss-Prot top hits (Blast detail)Scoree value
Q9C5K8 Protein TIFY 3B6272e-064
Q9S7M2 Protein TIFY 10B1811e-012
Q9C9E3 Protein TIFY 11B1747e-012
Q9M246 Protein TIFY 3A1747e-012
Q9LDU5 Protein TIFY 11A1406e-008

TrEMBL top hits (Blast detail)Scoree value
B9HCN5 Predicted protein3291e-028
B9RR07 Putative uncharacterized protein3291e-028
B9IKF8 Predicted protein2922e-024
C6SZR0 Putative uncharacterized protein2762e-022
C6SXQ9 Putative uncharacterized protein2716e-022

Arabidopsis top hits (Blast detail)Scoree value
AT5G20900.1 JAZ12 (JASMONATE-ZIM-DOMAIN PROTEIN 12)6074e-063
AT1G74950.1 TIFY10B1819e-014
AT1G72450.1 JAZ6 (JASMONATE-ZIM-DOMAIN PROTEIN 6)1746e-013
AT3G43440.1 JAZ11 (JASMONATE-ZIM-DOMAIN PROTEIN 11)1746e-013
AT1G17380.1 JAZ5 (JASMONATE-ZIM-DOMAIN PROTEIN 5)1405e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
89  39%
 
97  30%
 
65  22%
 
71  4%
 
101  4%

Unigene MembersMember information