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Information for unigene UN14130
| FASTA Sequence |
| Unigene ID: UN14130 | Length: 709 |
| SNP | GAATCTTCTTCTGGATCCAACCAAATCCTCTCGAAGCAGAGTAACAACTAGCAAGAGGGAAGCCAAAAATATGACGACAATGGCGA
CGCAGGGGGCTTTTCTCCGATTACGAACGACCTCATCCTCAAAGTCCGTCGCTAAGCCAACGGAGCTCGGGTTCCTCAGCTCCCAG
CTCAGTGGCTTAAGAATCTCGCATGCTCCCTCCAGTGACGTCATCAACCCCATCTCCCTTCCTTCCTTTCCCGGTGCTCTTCAGCC
AATCGTCGCCCGGAGGATCTGTCCTTTTACTGGGAAGAAAGCAAACAGAGCAAACAAAGTCTCCTTCTCTAACCACAAGACCAAGA
AGTTGCAGTTCGTCAACTTACAGTACAAGAAGGTTTGGTGGGAAGCTGGCAAACGTTTCGTCAAGCTTCGTTTATCAACAAAGGCC
TTAAAGACCATTGAGAAGAACGGTCTCGACGCTGTTGCCAAGAAAGCTGGCATAGATCTTCGCAAGAAATAGATATGATTTGATAT
GATACTGCATTTCTTTCTGTTAATTTCTTTTCTTAATACATTTCCTTCAATGGAACGTTTATGAGTTTGAATCAGAAAACTGTTTA
ATGTTTCCCCCTTCTTGAGCCAGTCAAGAATTAGACAAAACTCGTTAAAAAAAGAAAGAAAAATATTACATTTCATGTTTTCGATT
TTATATATTATATCGTTTATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002879453 50S ribosomal protein L28, chloroplast [Arabidopsis lyrata subsp. lyrata] | 606 | 7e-061 |
| NP_565765 50S ribosomal protein L28 [Arabidopsis thaliana] | 597 | 8e-060 |
| XP_002892218 50S ribosomal protein L28, chloroplast [Arabidopsis lyrata subsp. lyrata] | 524 | 2e-051 |
| ABK95755 unknown [Populus trichocarpa] | 493 | 9e-048 |
| ABK96762 unknown [Populus trichocarpa x Populus deltoides] | 489 | 3e-047 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O22795 50S ribosomal protein L28, chloroplastic | 597 | 4e-061 |
| P30956 50S ribosomal protein L28, chloroplastic | 445 | 2e-043 |
| Q8DG62 50S ribosomal protein L28 | 259 | 6e-022 |
| B8HUV7 50S ribosomal protein L28 | 257 | 1e-021 |
| B1XIH9 50S ribosomal protein L28 | 257 | 1e-021 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9PHA2 Putative uncharacterized protein | 493 | 6e-048 |
| A9PK59 Putative uncharacterized protein | 489 | 2e-047 |
| B9HSH5 Predicted protein (Fragment) | 483 | 9e-047 |
| B9HKS8 Predicted protein (Fragment) | 467 | 6e-045 |
| C6THQ5 Putative uncharacterized protein | 466 | 8e-045 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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