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Information for unigene UN14145

FASTA Sequence
Unigene ID: UN14145Length: 1039 SSR 
GGATCTCCGTTTCTCACTCATTCATTCATTCACGTCTGAAACAGAGAGTTTTAGGGTTTTTTTTTTTGCGGAGGTTTCAAGGAAGT
AAAGTAACGATGGCGGAAGAGCACAAACACGAGGAATCAATCATGGAGAAGATAGCTGAGAAGATCCATGGTCACGATTCCTCTTC
TTCTTCGGATTCAGATGACGAGAAGAAGGAGTCGTCTATCAAGACGAAGATCTACTGCCTCTTCGGAAGAGAAAAGCCTGTTCACA
AGGTCTTCGGTGGCGGCAAACCTGCCGACATATTCCTATGGAGGAACAAGAAGGTATCAGGAGGAGTGTTGGGTGCTGCAACTCTC
TCCTGGATCTTGTTCGAGTTGCTTCAGTACAACCTCCTCACTCTCGCTGTTTTGTTCTTGTGGTCTAGTGCTACTACCTTCATTCA
CAAGAAACCTCCTCATATCCCTGAAGTTCACATCCCCGAGGAAGTCGTTCTCCAGCTTGCTTCTGGACTAAGGATTGAAATCAATC
GTGGTTTTACTCTTCTTAGGAACATCGCGTTAGGGAGAGATCTCAAGAAGTTCCTCATGGTTGTTGCTGGTTTGTGGGTTTTGTCC
AAAGTTGGTAGCTCATGCAACTTCTTGACCTTGATCTATATCGCAACTGTTCTTCTCTTCACCGTTCCCGTGCTTTACGAAAAGTA
TGATGATAAAGTAGATGACTTTGCTGAAAAGGCAATGAAGGAGATCAAGAAGCAGTACGCTGTGCTTGATGAGAAGGTTTTGAGTA
AGGTCATGAGCAAAATCCCCAAAGGAGCCTTCAAGAAGAAGGATTAGAGAGTGTCTACGTTTCTCTCATCATCATCATCATCATCT
GAGTCTTCCAGGTTGATATATAAATCTCGAAGCATTGTTTTTTCTTACTTGTAATGGAAGCTGTGTTGGTTAATAAACCCTTTTAG
TCTCTCAAATGTCTGCTTTGTGGGGGTTTTATTCGGGGGTTTAACCAAATTTTATACAACCATATTAAATTTGAGCTTATATCTTC
GCGTCAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_176592 reticulon-like protein B3 [Arabidopsis thaliana]10641e-113
BAH57206 AT1G64090 [Arabidopsis thaliana]9644e-102
BAJ34499 unnamed protein product [Thellungiella halophila]8418e-088
XP_002887921 reticulon family protein [Arabidopsis lyrata subsp. lyrata]6591e-066
NP_001185307 reticulon-like protein B3 [Arabidopsis thaliana]6463e-065

Swiss-Prot top hits (Blast detail)Scoree value
Q9SH59 Reticulon-like protein B310645e-115
Q9SUR3 Reticulon-like protein B18172e-086
Q9SUT9 Reticulon-like protein B28064e-085
Q9FFS0 Reticulon-like protein B45852e-059
Q9M145 Reticulon-like protein B75466e-055

TrEMBL top hits (Blast detail)Scoree value
C0Z3C7 AT1G64090 protein9643e-102
B9RCJ7 Putative uncharacterized protein5172e-050
B7FIA7 Putative uncharacterized protein5136e-050
B9GX32 Predicted protein5136e-050
B2WS91 Reticulon family protein5073e-049

Arabidopsis top hits (Blast detail)Scoree value
AT1G64090.1 reticulon family protein (RTNLB3)10653e-116
AT4G23630.1 BTI1 (VIRB2-INTERACTING PROTEIN 1)8172e-087
AT4G11220.1 BTI2 (VIRB2-INTERACTING PROTEIN 2)8063e-086
AT5G41600.1 BTI3 (VIRB2-INTERACTING PROTEIN 3)5851e-060
AT4G01230.1 reticulon family protein (RTNLB7)5152e-052

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  25%
 
82  50%
 
121  25%

Unigene MembersMember information