Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN14157

FASTA Sequence
Unigene ID: UN14157Length: 1137 SSR 
AATACAAATAAAAGCGATCTTAATATCATTTGATGCGTTTACAGATGTCACAAAGTTGTACATTAATATTTTCACAAATTTATACA
AAGTCTACCCAAACCACATTACAGAAAACAGAGTAAGCAAGATAGCAAAGATATTACAACCAACAGAAAAACTTTATTAAGAAGGT
TATGTTGATGAATCACTATCCTTCAATAAGTCATCCATTTGCTTCACTTGATCATCACAGTCCCTTACTTTATGTTCTGCTGCGTC
AACATCTTTCTTCTTAGCATTATTATCATTTTCAATGACATGAACATCATACACAATCGCTTCTTGATCATCATCATCATCATCAT
CAATGTGCTTGTAAGTCTCAAGTTCCTTCTCAAGAAAATGCTTTTCCCTCTCCCTTTTGAATAAAATCTCCTTGAGAATATTCATC
TCTACCTCATCATATGCAAATTTCTCCTCAATCATTCTCTCATACTGCTTCCCTTCCATTTCAAGTGAAGCTTTATCAGCTTGTAA
CCTCAGAATCATAGCCATGGCTTCATCAGCTGCTGACGCTGAAGCCGCTCTTTCTTCCTCCAATTCCACGATTAGAGCAGATCGAG
CCAACCTCTCTTCCTCAACAGCTTCTTCAAGCAATCTCACCTTATTCATTAATTCCAAGTTCTTATCTTTACCAACCGAACTCTTT
CTCTCTTCTTCTTGGTCTTGATGATGCCAAACGCTTGTTCTACTGGCAACGGCCATCTTCTGGATTCGGAGTATGATCTCGAATGG
CAAGTCAAAGAGAAGTTTATGGACGTTTTGGTACCCAAGCATTCCAGAAGAGGGACAAGGCAAATAGAGTAAGAACTTGGATGCAA
TAAAGACCAAAGCTGATACACATAATAGACAATAAGCAAATGCTAATTCAAGAAAAGCAACCAATATTCCAGTAAACGTTATCCGA
TAACTTTCAGGGTAGTCCATTTTTGTGTAGCCAGATCTTTCCGGAATCTGAAATCTCAGCGTCTGAATATGATGAAACCAAATCTG
ATGATCTGTAAAGAAAAACTCAAACGGGGGAAAAAGTCAAAGAAGAAAGAGACGGGAAGAAATTGCAGGAGCTATGGCTTGTGTAG
CTTCGAATAAGAGTCTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002863266 hypothetical protein ARALYDRAFT_497080 [Arabidopsis lyrata subsp. lyrata]10067e-107
NP_193052 uncharacterized protein [Arabidopsis thaliana]8086e-084
CBI17315 unnamed protein product [Vitis vinifera]3651e-032
XP_002266466 PREDICTED: hypothetical protein [Vitis vinifera]3623e-032
XP_002521088 conserved hypothetical protein [Ricinus communis]3597e-032

Swiss-Prot top hits (Blast detail)Scoree value
Q75JC9 Uncharacterized protein DDB_G02716701291e-006

TrEMBL top hits (Blast detail)Scoree value
Q9SVR1 At4g131608084e-084
B9S519 Putative uncharacterized protein3595e-032
B9RWI0 Putative uncharacterized protein3561e-031
B9IJH5 Predicted protein3542e-031
B9RWI2 Putative uncharacterized protein3443e-030

Arabidopsis top hits (Blast detail)Scoree value
AT4G13160.1 unknown protein8281e-088
AT1G04890.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Intermediate filament protein, conserved site (InterPro:IPR018039), Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13630.1); Has 6609 Blast hits to 4661 proteins in 382 species: Archae - 48; Bacteria - 283; Metazoa - 4004; Fungi - 343; Plants - 346; Viruses - 6; Other Eukaryotes - 1579 (source: NCBI BLink).3271e-030
AT4G13630.1 unknown protein3262e-030
AT5G16720.1 unknown protein2411e-020
AT1G70750.1 unknown protein2267e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
84  57%
 
121  14%
 
101  14%
 
141  14%

Unigene MembersMember information