Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN14164

FASTA Sequence
Unigene ID: UN14164Length: 823  SNP
GGGATTTCGAGAAGCACTGAAAAAATGATGTCAACAACGTCGTCTCTTTACTCTCCTCTGCTTCTTCTTCCTCTTCTCAACCTTAC
TCGCTGTTTCCGAATCCAAACTCTTGGAGCCTCAAGCCGCTGAGTCTTTCAATGTCAGCCTCATCCAGAAATTTGGGGCTAGTTGT
TCTTACACAGTGATCATCTCTACGAGCTGTTCCTCATCGAGGTACACTCGCGATCAAATTAGCGTCGCTTTTGGAGATGCATACGG
GAATCAGATATACGCACCAAGGCTTGACGACCCGTCTATTAAGACCTTTGAGCAGTGCTCATCAGACACATTTGAGATTAACGGAC
CATGCACATACCAAATATGCTATGTGTATCTCTACAGGTCTGGTCCCGACGGTTGGATTCCAGAGAGTGTCAAGATATACAGCCAT
GGCTCCAGAGCTGTCACCTTCCCGTATAACACGAACGTCCCTGAGAGTATATGGTACGGTTTCAACTACTGCAACAGCGCCTCGGG
TTCTAATGTCCTACCCATTGGTCTCCGAAGGATTGTGCTCATACTGCTTGGCTTTATTCTGGCCGGTTCAACATTGCTATTGTAAG
ATGTTGTGGTTCTGGTTTTAATGTCGGGTTTGTGTGAACATAATATGAGTAGGAACTTATGCAGAATAATATGTACTGTTATTGGA
AAATTGGGTGTATTGATATCCCTTCAGAAGATTTCTGTAATAACTATGAAGTTCCTTACTACTGCTAATTTACAGTGTGTAGATTT
TATAAACGTAATGTATTGGTTACAGATTTTGTGTTTGTTCATTAACAGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002866478 hypothetical protein ARALYDRAFT_496397 [Arabidopsis lyrata subsp. lyrata]8182e-085
NP_201026 Embryo-specific protein 3, (ATS3) [Arabidopsis thaliana]8012e-083
BAA97184 unnamed protein product [Arabidopsis thaliana]8012e-083
BAD43699 unknown protein [Arabidopsis thaliana]7824e-081
ACU13260 unknown [Glycine max]5791e-057

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q6NPM5 At5g622008012e-083
Q9LVB6 Similarity to embryo-specific protein 38012e-083
Q680D1 Putative uncharacterized protein At5g62200 (Fragment)7823e-081
C6SVI7 Putative uncharacterized protein5799e-058
C6SVB7 Putative uncharacterized protein5682e-056

Arabidopsis top hits (Blast detail)Scoree value
AT5G62200.1 embryo-specific protein-related8027e-086
AT2G41475.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Embryo-specific 3 (InterPro:IPR010417); BEST Arabidopsis thaliana protein match is: embryo-specific protein-related (TAIR:AT5G62200.1); Has 60 Blast hits to 60 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).4523e-045
AT5G62210.1 embryo-specific protein-related3871e-037
AT5G07190.1 ATS3 (ARABIDOPSIS THALIANA SEED GENE 3)3295e-031
AT5G07190.2 ATS3 (ARABIDOPSIS THALIANA SEED GENE 3)3116e-029

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  33%
 
71  11%
 
93  33%
 
112  22%

Unigene MembersMember information