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Information for unigene UN14183

FASTA Sequence
Unigene ID: UN14183Length: 1375 SSR 
GGGGAAAAAAAAACTGACATTTCAATATGCGAGTTACAATTATGAAGGATTGGTCAACAACCAATATCACTTTCTTCTTTTCATTC
GTTTGCCTCTCTCTCAGAGTAATCAATATACACAGTGCAAACAAAAGAGAAAACAAGTCTTGCAGATAAACTCTCTACCCTCTTCT
CTACTTATCTCACCGGAAACAAAAACTCTCTATCCTCTTACAGTGTCGTTAGACTCTCTCTCTCTCATACACACACATACAACAAG
GATACAAACTCAGTCCTGCCAGCTTATAAGTGCGACTACTATGGCATCATCAACATCATGTCGCCGCTTCCGCTAGCGGTTGACAA
AGGGCGTTTCATAGGAACGGGGAGCTCGAGAATGATTAGGAAATAGGAGCGTTCCGACTCTCGGATGTACTGAACCTCACCGTTCA
TGAGCTTTAGAATCTTTCTACATATGCTTAAACCTAACCCTTCAGGGCTCGTCCACCTGCTGCTATGAAACATGTCTCGGACCAGT
TCTGGAGGCAGACCTTCACCTGGGCACGCCATTCTAAATTCTGTGCGGATAGAGTAGAATCCGTCAGCCATTTGCTTTGGAACTTG
GCTAAGATGGATCTCCACCCACTCATGGGACGGTGCATACCGGACTATACTCAGTAGAAACTCAGCTAGGAGTTGTTGAATCCTTG
TCTGGTCTCCATAAACTTGTATAGATTTGATCTCTTCAGGAATGTCACGGATTAGCTGAACACCTCTCTCCTTTAATAAGAACATC
GCCTGGCTTACAATCGCGTTTATGACACTTCCGAGTAAGAACTCTGTTCTTTGTAGCTCAAACGAACCGTCTTCAATCCTTTCAAG
ATCCATGTCACTGACAATCCTTGAGATTTGTTTCTCGCAAGAAACACTTGTTTCGAGAAGCTGTTTCTGATCCTCGTTCAAGTCTG
TAGCTTCCAATAACGAGTTTGTGAAACGCAAACCGCTCAAAGGATTCTTTACCACTTGACAAATGTAAGCTAGTTCTTTCGCCTTT
GTGAAACACTCTGTGTCTTGCCTTCGTTGGACTGCTAAAGCTTGCTGCAGCTCAGGACTCGGGATCTGCAAGAAACAGAAAGCTCC
AATAACCTTTCCTTCGAGGTTTACTCGCTTGTTTGCAGTCAATAGAGCCTGAACAAACTTCCCGTTGCGGTCAAAGAACGGGAAAG
GGAACTTGTCTGTTTCTTGGCCACCGATCGCATTATGCAATACAATCATGAACTTGGTTAATGCATCAGGACCCTTTAGCCTGCAA
TAGCTCCCGAACACTTCCCCAACAAGCATTTTCCCAATCACTTCACTGCGAGACCAACCAGTGAGCTTTTCCAACGCGGTGTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34089 unnamed protein product [Thellungiella halophila]17102e-188
AAW56580 phytochrome B [Arabidopsis thaliana]16985e-187
ABY61300 phytochrome B [Arabidopsis thaliana]16985e-187
ABY61301 phytochrome B [Arabidopsis thaliana]16985e-187
ABY61307 phytochrome B [Arabidopsis thaliana]16985e-187

Swiss-Prot top hits (Blast detail)Scoree value
P14713 Phytochrome B16955e-188
P42497 Phytochrome D13944e-153
P29130 Phytochrome B13211e-144
P34094 Phytochrome B13201e-144
Q9ZS62 Phytochrome B113102e-143

TrEMBL top hits (Blast detail)Scoree value
B0FWI4 Phytochrome B16983e-187
B0FWI5 Phytochrome B16983e-187
B0FWJ1 Phytochrome B16983e-187
Q5G899 Phytochrome B16983e-187
B0FWI9 Phytochrome B16974e-187

Arabidopsis top hits (Blast detail)Scoree value
AT2G18790.1 PHYB (PHYTOCHROME B); G-protein coupled photoreceptor/ protein histidine kinase/ red or far-red light photoreceptor/ signal transducer16954e-189
AT4G16250.1 PHYD (PHYTOCHROME DEFECTIVE D); G-protein coupled photoreceptor/ red or far-red light photoreceptor/ signal transducer13943e-154
AT4G18130.1 PHYE (PHYTOCHROME DEFECTIVE E); G-protein coupled photoreceptor/ protein histidine kinase/ signal transducer7431e-078
AT1G09570.1 PHYA (PHYTOCHROME A); G-protein coupled photoreceptor/ protein histidine kinase/ red or far-red light photoreceptor/ signal transducer7171e-075
AT1G09570.2 PHYA (PHYTOCHROME A); G-protein coupled photoreceptor/ protein histidine kinase/ red or far-red light photoreceptor/ signal transducer7171e-075

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  29%
 
82  29%
 
113  43%

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