RadishBase

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Information for unigene UN14272

FASTA Sequence

Unigene ID: UN14272	Length: 1065		SNP
GGATTGCACCAAACTCTCTGCAACTTGAAACCCGTCCTTATCTCATCAAACCTCTTCCTCTTCATAAAGTCTCTAGAATCATCCAG TCCTTTATATTCTCTCTTACTTCTCTTGATATATAAAGAGATACATAAGAACATTAAAAACAGAACATCTTTTCTACAAACGATAA TAGCTATCTGAAACATGAACTCGACGATAGCTTCCAAAGACGGACGTGTTTCAGGTGGCTCGGCAGAGTTTCTTCAGACTAGATTG AATCATATACATGATCCCAAGGAGAACCAGTGTTCTTCGGTTCTCATTAAGCATATCAAAGCGCCTGTTCATCTTGTTTGGTCTCT AGTGAGGAGATTCGATCAGCCACAGAAGTACAAGCCTTTTGTCAGCAGGTGTGTGATGAAAGGTGATGTTGGCATCGGCTGTGTCC GAGAGGTAGACGTTAGATCTGGCCTCCCGGCTACCACTAGCACCGAGAGGTTGGAGTTCTTGGACGATAATGAACACATTCTTGGT ATCAGAATCCTTGGTGGTGATCACAGGCTTAAGAACTACTCATCAGTGGTTACAGTACATCCAGAGATAATAGATGGAAGAGCGGG AACAATGGTAATAGAGTCATTCGTGGTGGATGTACCAGAAGGGAACACCAAAAACGAGACTTGTTACTTCGTGGAAGCACTTATAC GATGCAATCTCAATTCTCTGTCCAGCGTTTGCGAAAGAATGGCAGCTCAGGACATGACATGAGTTGTGAACCTGTACTTACGTATT TTTCCTCAAATTGTAGGATTGTATAGCAACATTGGTAAGCGAAATTGATCGTGACATACATACTCTCTGGATATTATAGCCAAAGA GTCCTGAGTACTCATTTGGACATCTCCATGACTGATTCTGAATTTACTGGTCGTACAAGTTAAAAATTAGTAGGAATGTAGCTTTA TAATTTAGTAGGAATGTAGCTTTACCTTTCAGTCACGTTTCTATTCAAAAAATATATGTAGCACCAAGAAGTGCGTTAATGTTTAA TTTTTTGGTTTTAAAAAACAGAGGAAATTCAGC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
XP_002878400 predicted protein [Arabidopsis lyrata subsp. lyrata]	791	5e-082
ACU14811 unknown [Glycine max]	733	3e-075
ACU21210 unknown [Glycine max]	732	4e-075
ACG76109 pathogenesis-induced protein [Arachis hypogaea]	731	5e-075
XP_002302624 predicted protein [Populus trichocarpa]	725	2e-074

Swiss-Prot top hits (Blast detail)	Score	e value
Q1ECF1 Abscisic acid receptor PYL7	705	2e-073
Q84MC7 Abscisic acid receptor PYL9	705	2e-073
Q9FGM1 Abscisic acid receptor PYL8	688	2e-071
Q8H1R0 Abscisic acid receptor PYL10	637	2e-065
O80920 Abscisic acid receptor PYL4	457	1e-044

TrEMBL top hits (Blast detail)	Score	e value
C6SZY8 Putative uncharacterized protein	733	2e-075
C6THA8 Putative uncharacterized protein	732	2e-075
B5LNQ2 Pathogenesis-induced protein	731	3e-075
B9GR01 Predicted protein	725	2e-074
A9P7Y8 Putative uncharacterized protein	722	4e-074

Arabidopsis top hits (Blast detail)	Score	e value
AT1G01360.1 unknown protein	705	2e-074
AT4G01026.1 unknown protein	705	2e-074
AT5G53160.2 unknown protein	688	2e-072
AT4G27920.1 unknown protein	637	1e-066
AT2G38310.1 unknown protein	457	1e-045

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


6	3			30%


12	2			20%


8	3			30%


11	2			20%

Unigene Members	Member information