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Information for unigene UN14280

FASTA Sequence
Unigene ID: UN14280Length: 1183 SSR 
GGGGCGACACGGCTGCCAACTACTTCAGTTTCTAACTGCACAGGAATCATGAAGCCAGTCTTCTGTGGAACTTTGAGTATGATGCG
CGTGAGGGTGATCTTGAAAGGCTTTTCAGGAAATACGGAAGGGTTGAGAGGGTGATATGAAAGCTGGGTTTGCTTTCGTGTACATG
GAAGATGAGAGGGTGCTGAAGATGCAATCCGAGCACTTGACCGCATTGAATTTGGACGCAGGGGACGCAGACTCCGTGTTGAGTGG
ACAAAGGGTGAGCGTGGAGGCGATAGAAGATCTGGTGGTGGTGGTGGTTCAAGGAGATCCTCATCCTTGAGGCCTTCCAAGACTCT
GTTTGTGATAAACTTGATGCGGACAATACTCGGACCCGGGATCTAGAGAGGCACTTTGAACCATATGGCAAAATTGTAAACGTTAG
GATCAGGAGGAACTTTGCATTTGTCCAGTACGAGGAGCAAGAGGATGCCACTCGAGCTCTTGAGGCTACAAACAACAGTAAGCTGA
TGGATAAGGTGATCTTGGTGGAGTATGCAATGAAAGATGAAAGGAGAAGGCGATCACCTAGTCCTTACAAGAGAGAGAGAGGGAGC
CCTGATTACGGCCGAGGGGGCAGTCCTGTTGCTGCATACAAAAGGGAAAGGACCAGTCCTGACTATGGGAGAAGACGTAGCCCAAG
TCCTTACAAGAGAACAAGGCGTAGTAGTCCAGAGTATGGCCGCGACCACCGCCACAGAGGCAATGAGAGCCCCCGGAGGAGGGAGA
GAGTTGCGAGCCCCAGGTACAGTCGAAGTCCTGACAACAAGAGAGAGAGGGTGAGTCCTGATCGCAGCCCCTTTAAGAAGGAAAGT
TTGAAGAACGGAGATGGTGAAGTTGATAGCCCAAGGAGGGAGAGATCGAGGTCTAGCTTTGAGAATGGGCAAGTTGAAAGCCCTGG
CTCTATAGGGAGAAGGGACAGTGATGGTGGCTATGATGGTCAGATAGCCCCCCTATGCATAAGAGCCGGTTTCGTTCGCCTCCAGC
TGAAGAGTGAATGAAGAGTGGATACATCAAAGTAGGATGATGTAGTCAAACGCTCTGTGTCATGTGTTGTGTTTAGTTTCTTTGCT
ATTTGAAACATTCGAACTGGGATTTCTTTTATTGTCGGATTGAAAAACTTTTTTCTTGTGTGCTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869670 hypothetical protein ARALYDRAFT_492278 [Arabidopsis lyrata subsp. lyrata]6421e-064
NP_194280 arginine/serine-rich-splicing factor RSP40 [Arabidopsis thaliana]6374e-064
NP_974616 arginine/serine-rich-splicing factor RSP40 [Arabidopsis thaliana]6374e-064
CAB81360 splicing factor At-SRp40 [Arabidopsis thaliana]6374e-064
NP_001078447 arginine/serine-rich-splicing factor RSP40 [Arabidopsis thaliana]6374e-064

Swiss-Prot top hits (Blast detail)Scoree value
P92965 Arginine/serine-rich-splicing factor RSP406372e-065
P92966 Arginine/serine-rich-splicing factor RSP415233e-052
P92964 Arginine/serine-rich-splicing factor RSP313218e-029
P26686 Serine-arginine protein 551263e-006

TrEMBL top hits (Blast detail)Scoree value
A8MRZ9 AT4G25500 protein6373e-064
B9DH58 AT4G25500 protein6373e-064
Q3E9W5 Putative uncharacterized protein At4g25500.26373e-064
Q9M0K9 Splicing factor At-SRp40 (Fragment)6373e-064
Q3E8C5 Putative uncharacterized protein At5g52040.25235e-051

Arabidopsis top hits (Blast detail)Scoree value
AT4G25500.1 ATRSP35; RNA binding / nucleic acid binding / nucleotide binding6372e-066
AT4G25500.2 ATRSP35; RNA binding / nucleic acid binding / nucleotide binding6372e-066
AT4G25500.3 ATRSP35; RNA binding / nucleic acid binding / nucleotide binding6372e-066
AT5G52040.1 ATRSP41; RNA binding / nucleic acid binding / nucleotide binding5233e-053
AT5G52040.2 ATRSP41; RNA binding / nucleic acid binding / nucleotide binding5233e-053

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  67%
 
121  33%

Unigene MembersMember information