Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN14283

FASTA Sequence
Unigene ID: UN14283Length: 1183 SSR 
CATCTGAGGAAACACTCGTCTATATTCAATCAACTAATAAATTGGCCTCACACTTGGTGCCGTCTTACATGAATGTTAGAGAACAA
TTCTCATCTCATTTTTGGATGATATGTTTGCCCCCAATTATATGATCCTCGAGTTGCCATTATTATTATAAAAACTAGTTTCTAGC
CAAGGGTTGTTTGCTAGCAAAAGTATTAAATTACATCTCAAAGTCTAGTAAAATTAAAAGTTTTTAAAAAAGCTCAAGCAATCCTT
TAATAAAGCTTCTTACACCACACCAGAAGGAAGACGAAGAACGAGCTGTCCACCCATTAAACTCTGAACATAGTAATAGCAAAAAT
CTGCAAGGATGAAAGTTTGGATAATTTCAGAGAGGAGGACCATTAAAGGCCATAATCCATACCCTAATGCAGTCAGCAACCTCCCT
CTGGTATCCAACACCTGAAGGATCCAGTGTGCACAACTCAAGAACCTAGCGATTCCCAAAGCAAATACGTAATGTGCTGTAAACGG
TTCCACGATCTTAGTGTTCTGCATGACTCTTAGTTGAGGAAGAACTGAAACAGCTTCAAGATAAACACAGAAGGCCCAAAAGAGCC
TGTTTATGATGTGGTGACGTGTTGATGGATGAATGAGCAAAGATACAACAGCACATGGGACTACAACGTAGTAGATGGGAAAGTTG
TCCTTATCTTCCATATAAGTAGGTCTAAGATTGAAACGGATCATATAAATGACCCAAAGGGTGGTGGCCAAAGTAGCAGAATCAAG
TAACGTGTGAAGATCAAACTCCATTACAAAGCTACAATACAACCGCACAGCCAGAAACAAAGCCGTTAGCTCCTGCGTCTTGAGAG
ATATCCCAGCGCATGTCTTCTCCTTGGTGAGTTTGTAGATAAGAACAGAGATCCCAACAGCATGGACAGCCTCGGACGCGATGAAA
AGGTTGTCGTGCTCGTGTACAATCACCCTAAGGAAGACGAGGATCGTCATTGCCGTAACCACACAAAGAAACGCCTTAACCTTCGG
TGGCTGCCGGCGAATCCACGACGTCACGGTCTGAATCGGACTCTTCTCCGCCTTCATCTTTCAGATCTCTCTCTCTCTTTCTTTCT
ATTGGCTCTGATTATGATATTAGTGTGTGATTATTACTAATTAACTTCGTCTTTCGTTTACAATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_173426 ER lumen protein retaining receptor-like protein [Arabidopsis thaliana]13014e-141
XP_002893082 hypothetical protein ARALYDRAFT_312925 [Arabidopsis lyrata subsp. lyrata]12432e-134
XP_002889042 ER lumen protein retaining receptor family protein [Arabidopsis lyrata subsp. lyrata]12405e-134
NP_177704 ER lumen protein retaining receptor family protein [Arabidopsis thaliana]12316e-133
AAF79915 Contains similarity to ER lumen protein retaining receptor from Caenorhabditis elegans gi|6686285 and contains ER lumen protein retaining receptor PF|00810 domain [Arabidopsis thaliana]12291e-132

Swiss-Prot top hits (Blast detail)Scoree value
Q09473 Putative ER lumen protein retaining receptor C28H8.42823e-024
P48583 ER lumen protein retaining receptor2653e-022
Q611C8 ER lumen protein retaining receptor2634e-022
O44017 ER lumen protein retaining receptor2626e-022
O76767 ER lumen protein retaining receptor2563e-021

TrEMBL top hits (Blast detail)Scoree value
Q84TL5 At1g7576012314e-133
Q9LNS6 T20H2.24 protein12297e-133
B9STD7 ER lumen protein retaining receptor, putative12144e-131
B8BDV6 Putative uncharacterized protein12072e-130
Q69SG3 ER lumen protein-retaining receptor-like12072e-130

Arabidopsis top hits (Blast detail)Scoree value
AT1G19970.1 ER lumen protein retaining receptor family protein13021e-143
AT1G75760.1 ER lumen protein retaining receptor family protein12322e-135
AT4G38790.1 ER lumen protein retaining receptor family protein11676e-128
AT2G21190.1 ER lumen protein retaining receptor family protein11561e-126
AT3G25160.1 ER lumen protein retaining receptor family protein8494e-091

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  29%
 
82  29%
 
72  29%
 
111  14%

Unigene MembersMember information