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Information for unigene UN14299
FASTA Sequence |
Unigene ID: UN14299 | Length: 1668 |
SSR | SNP | GAATTTGATCGTTTGTTTCTTCGCCTTTCTCGTCCTTAGCTTTTTCTTCCCTCCTTAAATACCTACCTATACAGACAAATTTACTC
TGTTATCATCGAAAATTTTCTATTTTCTATTTTTTTCTTCGTTTTATTCCTCCTCCATATAACACAATCTTATCCCCATTGTTATC
AAGAAAACAAGGCGGGGAAAAAAAAAAAGCAATGGTTATGGCTATGGATCGGATCGCTTTTACCTCATCCCCATTCGCTTATCAAC
GTTCTTCTCATCCTCATGGCTACAGATCGTCTAGAGTTTTCATGTCTTCTACCATCCGTCCAGCCTCTACAGAGGTCACCAATGGA
AGGAAACCGCATCTCCCTCCACGTGAGGTCCATCTTCAAGTGAAATATTCAATGCCACCACAAAAGCTGGAGATCTTCAAGTCCTT
AGAAGGATGGGCTAACGACAACCTGCTGCCTTACCTAAAACCCGTCGAGAAATCATGGCAGCCAACTGATTTCCTCCCTGAACCTG
AGTCAGAAGGGTTCTATGACCAAGTCAAGGAGTTGAGAGAAAGGTGCAAAGAGCTTTCTGATGACTACTTTGTAGTGCTTGTTGGG
GATATGATCACAGAGGAAGCACTCCCAACTTACCAGACAATGATTAATACATTGGATGGGGTTAGAGATGAGACGGGAGCAAGTCC
TACTCCTTGGGCTGTGTGGACGAGGGCTTGGACTGCTGAAGAGAATAGGCATGGTGATCTTCTCAACAAGTATCTTTATCTCTCTG
GAAGAGTGGACATGAGGCAGATTGAAAAGACCATTCAATATCTGATTGGTTCTGGAATGGATCCAAAGACTGAGAATAACCCTTAC
TTGGGTTTCATCTACACTTCTTTTCAAGAGAGAGCTACCTTCATCTCTCATGGAAACACTGCTGGACTTGCAAAGAAGCTTGGGGA
CTCGAAGCTAGCGCAGATCTGCGGCACCATCGCTGCTGATGAGAAGCGTCATGAGACTGCTTACACCAAGATCGTAGAGAAGCTTT
TCGAGATCGATCCCGACACCACTGTCGTAGGCTTTGCTGACATGATGAGGAAAAAGATAGCCATGCCTGCTCATCTGATGTACGAT
GGCTCTGATGACAATCTGTTTGAGCACTTCTCCTCCGTGGCGCAGAGGCTTGGTGTCTACACTGCTAGGGACTATGCTGATATACT
GGAGTTTCTTGTCAGGCGGTGGAACGTGGAGAACTTGGCAGGTCTCTCTGATGATGGACACAAGGCCCAGGACTATCTCTGTAAAT
TGCCTGCTAGGATCCGCAAACTGGAAGAGAGGGCTCAAGGGAGAGGCAAAGACACTGCAAGAGACATACCTTTCAGCTGGATATTT
GGTCGAGAGATCAGGGCTTAAAAAGAAAAGTAGTATGATGCACAATCTCCTCACCATCACAATGATAAGGAGAGACTCTGTATTGG
AACATATGCTAGATAAAGTATGTGCGTTTTAGCCTTGTTTTGTTGGGATGATCACTATTGCTATTTTATTTATTTGTTTCAGTTTG
TATCCACTTCACTAATGTTTCTCTCTCTCTCACTTCCAACAGTTTGTAATTTTAAAAGATTGGGTTTGTACTGTGTTTTGAGATTG
TTAACAAGTTTCTTGATTATAAAAAAAATTGATT
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GenBank top hits (Blast detail) | Score | e value |
XP_002871710 hypothetical protein ARALYDRAFT_909604 [Arabidopsis lyrata subsp. lyrata] | 1849 | 2e-204 |
XP_002882244 hypothetical protein ARALYDRAFT_477504 [Arabidopsis lyrata subsp. lyrata] | 1790 | 1e-197 |
NP_186912 acyl-[acyl-carrier-protein] desaturase [Arabidopsis thaliana] | 1783 | 9e-197 |
AAM20635 putative stearoyl-acyl carrier protein desaturase [Arabidopsis thaliana] | 1780 | 2e-196 |
AAM64846 putative stearoyl-acyl carrier protein desaturase [Arabidopsis thaliana] | 1776 | 6e-196 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q41319 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 1581 | 1e-174 |
P22337 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 1577 | 3e-174 |
P32061 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 1575 | 5e-174 |
P22243 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 1532 | 5e-169 |
Q42807 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 1527 | 2e-168 |
TrEMBL top hits (Blast detail) | Score | e value |
Q9M879 Putative stearoyl-acyl carrier protein desaturase | 1783 | 6e-197 |
Q8L468 Putative stearoyl-acyl carrier protein desaturase | 1780 | 1e-196 |
Q8LBC6 Putative stearoyl-acyl carrier protein desaturase | 1776 | 4e-196 |
Q8LA10 Stearoyl-acyl carrier protein desaturase | 1762 | 2e-194 |
Q9LF04 AT5g16240/T21H19_160 | 1762 | 2e-194 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT3G02630.1 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative | 1784 | 2e-199 |
AT5G16240.1 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative | 1777 | 2e-198 |
AT2G43710.1 SSI2; acyl-[acyl-carrier-protein] desaturase/ stearoyl-CoA 9-desaturase | 1522 | 6e-169 |
AT2G43710.2 SSI2; acyl-[acyl-carrier-protein] desaturase/ stearoyl-CoA 9-desaturase | 1517 | 2e-168 |
AT3G02610.1 acyl-[acyl-carrier-protein] desaturase/ oxidoreductase/ transition metal ion binding | 1350 | 5e-149 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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