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Information for unigene UN14330
| FASTA Sequence |
| Unigene ID: UN14330 | Length: 1156 |
| SNP | GGAGGAAACCCCCAACGAGAAACCATAGAGAGCCTTGCTGATACAATGTTAGTTTACATTATTATTATTATGATATATAAAAGCAT
TCAAGTTTCTCGTGAAGGTGAGGAAGAACCCCTTCAATTTTTTCTCACAACACAAAACGCAAAAAGCTATGGCTGAAAAAGGAAAG
TGAGAGCATATGATATGTTTGGTTTCAAGCCGTTCGGATATAGTCTTGTGGGGTCACTTAGAGACTAATTTTTAGCTATGATCCCC
TTTGCCATCAAGAAATAATAGGAAACCACGTATAGCAACACGCACAACAAAAACATAACCAGCCAGTTTACTCCATGTTTTTCAGC
CGTTTTCTCAATGACAGTTAGCTTTGCCCTCGAGTCAAAAGATACTGACACTAAGCACCTTGAATCAGGGGAGAAACTCAGTGCGG
TGACCAAACCGAGATGAGCTTTCTTGACCAATTGGTGGGTCTTCATTTTTGTTGAATCAATTATCAAAACATCTCCTTCCATGTTT
CCAAGTGCAAGAAGCTTCCCATCAGCTGAGACATTAAAGGCGGATATAGAGTAGTTTTTCATAAGCTTTGAACGTCTTCTTTTCCA
TGTTGTTGTATCCCATGTTATAATACTCCCACCACGTTCAGTGTTTGCAGCAATGTAGAGAACTTCATTGCCTGTATTGTCAACAG
AGAATCTGCAGTAAGCAAACATCTCATCCTTCTCTTTTGATAGACTGGCAATGGCAGCAGAAGCCTTTACGTCCCAAACCCGACAA
AGTGGACCTCCAAGTGACACAAGAAACTTACCACTTTCGCTGAAAGTTAGGTTTTTAACTGATGCATGTGCCTTAGACTCATCAAG
TAACGTTTTCATACTAGGCCATTCAAAAATCCTCAAAGTCCCATCCTGTACTCCCCACCAGCAGCAAGCACGGACCCTTCCTGATT
AAACGCCAAAGCTAACTGTTGTCCGACGTCCTTCAATTCCTTAATCACTTCCTTGTCGATTTTCGATCTGACGGTTTCTTCAGGGA
TCCAGTCGGCGGCGTAGATCGGAAAGCCGTAGGTCTGCGTATTCGACGGTTGATTGGTTTCTGGAATCTGATTCGCCATTTGTTCC
TCTTCTCGAGCGAGCTCAATTGCGCGAAGTCTTCTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_568738 transducin/WD40 domain-containing protein [Arabidopsis thaliana] | 897 | 3e-094 |
| XP_002876752 hypothetical protein ARALYDRAFT_484065 [Arabidopsis lyrata subsp. lyrata] | 891 | 1e-093 |
| AAA32871 St12p protein [Arabidopsis thaliana] | 867 | 9e-091 |
| NP_178256 prolactin regulatory element-binding protein [Arabidopsis thaliana] | 866 | 1e-090 |
| BAA96978 protein transport protein SEC12p-like [Arabidopsis thaliana] | 838 | 2e-087 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q39221 SEC12-like protein 2 | 866 | 5e-092 |
| P25365 Putative guanine nucleotide-exchange factor SED4 | 131 | 8e-007 |
| P11655 Guanine nucleotide-exchange factor SEC12 | 125 | 4e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FGP3 At5g50550 | 897 | 2e-094 |
| Q9LUF6 Protein transport protein SEC12p-like | 838 | 1e-087 |
| B9SJ58 Prolactin regulatory element-binding protein, putative | 580 | 1e-057 |
| B9HW60 Predicted protein (Fragment) | 559 | 3e-055 |
| B9HJB9 Predicted protein (Fragment) | 545 | 1e-053 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G50550.1 WD-40 repeat family protein / St12p protein, putative | 897 | 1e-096 |
| AT5G50650.1 WD-40 repeat family protein / St12p protein, putative | 897 | 1e-096 |
| AT2G01470.1 STL2P (SEC12P-LIKE 2 PROTEIN); nucleotide binding | 866 | 4e-093 |
| AT3G52190.1 PHF1 (PHOSPHATE TRANSPORTER TRAFFIC FACILITATOR1); nucleotide binding | 288 | 5e-026 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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