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Information for unigene UN14349

FASTA Sequence
Unigene ID: UN14349Length: 859 SSR 
GGACCACCAACAATGGTTGTTTCGCTCTCGTCGTCGTCGTCGGTCACTTCCATTACGCTGCAGCCGAAACCGAAAACTATTTACGG
CTTAGGGACAGTAAATTTCGGTGGTTATTCGGTGAATTCTCACGGCGTCTCTCTCCGGCGAAGCGCCGTGGTCGTGTCGGCCATCA
CCGGCGCTTCCGGAACTGAAACTGCTGATTTATGGAAGGATAGGGAAGCTGTTGTTGCGTTCGCTCGTCATTTCGGATGCGTGCTG
TGTCGGAAACGAGCAGCTTATCTTGCGGAAAAGAAGGATGTGATGGATGCGTCTGGTGTTACTCTTGTTCTCATTGGACCTGGAAG
TATCGATCAGGCCAAAACTTTTGTGGAACAGACGAAATTTGAAGGAGAGGTGTATGCGGATCCAAACCACGCATCATACGAGGCGC
TTAAGTTTGCTTCAGGGGTTTCTGTCACATTTACTCCCAAAGCTGCTATGAAGATAATAGAGTCTTACATGGAAGGATACCGCCAA
GACTGGAAACTCTCGTTTATGAAAGATACTGTTGAAAGAGGCGGCTGGCAACAAGGTGGAATCCTAGTTGCTGGGCCTGGGAAAAA
CAACATCTCTTACATCCGCAAGGACAAAGAAGCTGGAGATGATCCGCCTGTTGAAGAGATCCTAAAAGCGTGTTGCGCTTAAAAGA
CATTATTGTTCTTTATCGTAGAGTCAAGACTCTCTCCTCTCCTCCTGTAGTTTATAGGGGACATAAAACTTTGATATACTTCGTTC
AATAAAACGTGTTCATTTGGTATGTATTTGTAAAGACATAAAACCCGATACATATTGGGTGTAGTGTATATATCTCTCCTTGTCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_030274 Thioredoxin-like protein [Arabidopsis thaliana]8165e-085
XP_002881499 hypothetical protein ARALYDRAFT_482716 [Arabidopsis lyrata subsp. lyrata]8156e-085
XP_002525198 conserved hypothetical protein [Ricinus communis]7287e-075
XP_002326159 predicted protein [Populus trichocarpa]7252e-074
ACU20039 unknown [Glycine max]7206e-074

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZUU2 UPF0308 protein At2g37240, chloroplastic8162e-086
Q5R7S9 Uncharacterized protein C1orf93 homolog1763e-012
Q8TBF2 Uncharacterized protein C1orf931754e-012

TrEMBL top hits (Blast detail)Scoree value
B9SGS9 Putative uncharacterized protein7285e-075
B9MT70 Predicted protein7251e-074
C6TDY7 Putative uncharacterized protein7204e-074
A9NTM4 Putative uncharacterized protein6561e-066
C5WNM5 Putative uncharacterized protein Sb01g0387906344e-064

Arabidopsis top hits (Blast detail)Scoree value
AT2G37240.1 INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65840.1); Has 252 Blast hits to 252 proteins in 46 species: Archae - 0; Bacteria - 20; Metazoa - 145; Fungi - 10; Plants - 66; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).8171e-087
AT5G65840.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37240.1); Has 167 Blast hits to 165 proteins in 51 species: Archae - 0; Bacteria - 28; Metazoa - 51; Fungi - 13; Plants - 59; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).2274e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  67%
 
91  33%

Unigene MembersMember information