RadishBase

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Information for unigene UN14371

FASTA Sequence

Unigene ID: UN14371	Length: 1015	SSR
GATTGTCTTGTCTGAAAGAAGAAGAAGAAGAAGACAAAAGCAGCAGCCATGGAGAACGACAGAGAAAAACAAATATACTTAGCGAA GCTCTCCGAGCAAACCGAACGATACGATGAGATGGTTGAGGCGATGAAGAAAGTTGCTCAGCTTGACGTGGAGCTCACGGTGGAGG AGAGGAATCTCGTCTCCGTTGGGTACAAGAACGTGATCGGCGCAAAGAGAGCTTCGTGGAGGATACTATCTTCCATCGAGCAGAAG GAAGAGTCCAAGGGGAACGAGGAGAATGTCAAGAGGATCAAGAACTATCGCAAGAGTGTTGAAGATGAGCTTGCTAAAGTTTGTAA TGACATCTTGTCTGTCATCGATAAGCATCTCATCCCTTCGTCTAAGGCTGTCGAATCTACGGTCTTTTTCTACAAAATGAAAGGAG ATTATTATCGGTATCTGGCAGAGTTTAGTTCTGGTGATGAACGCAAGGAAGCTGCTGATCAGTCTCTTGAGGCATATAAGGCTGCT GTTGCTGCTGCAGAGACTGGTTTAGCACCCACGCATCCAGTTAGACTTGGCCTGGCGCTGAACTTTTCTGTTTTCTACTATGAGAT CTTGAACTCTCCTGAAAGTGCATGTCAATTGGCTAAGCAAGCATTTGATGATGGAATCGCTGAGCTTGATAGTCTAAACGAGGAAT CATACAAGACAGCACTCTTATCATGCAGCTACTTAGAGACATCTCACTTTGTGGACTTCTGACCTCCCAGAGGAAGAGACGAGCCA TCCAAAGGTGATGAGCCTCAAGAAGAGAAATGAATCCTGAATCTGTCTGTGAAAAGAGAAACGGCTCTTGGTGCATCCTAAATCAT AAACCGAAGACAGCAATTTCAGGTGTAATTTTTTTTTTAATCTTAATGTTTTTCCTGATGATGTTTTCAGATCATTGACGTTCTAC AACATAACACTACCCATCTTCATCTTTCTCATGATGTTTTGTCTATTTCACTTAGTTTTTTTGGTCTTT

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
ADO95305 14-3-3-like protein GF14 Epsilon [Eutrema salsugineum]	1071	2e-114
XP_002893217 hypothetical protein ARALYDRAFT_313117 [Arabidopsis lyrata subsp. lyrata]	1061	2e-113
NP_564167 14-3-3-like protein GF14 epsilon [Arabidopsis thaliana]	1052	3e-112
NP_849698 14-3-3-like protein GF14 epsilon [Arabidopsis thaliana]	1052	3e-112
ACN73532 1433-1 [Brassica napus]	1046	1e-111

Swiss-Prot top hits (Blast detail)	Score	e value
P48347 14-3-3-like protein GF14 epsilon	1052	1e-113
P93212 14-3-3 protein 7	926	5e-099
Q9S9Z8 14-3-3-like protein GF14 omicron	883	4e-094
Q96453 14-3-3-like protein D	870	1e-092
P93214 14-3-3 protein 9	851	2e-090

TrEMBL top hits (Blast detail)	Score	e value
B9DFR1 AT1G22300 protein	1052	2e-112
C0KJK4 1433-1	1046	9e-112
Q3ED73 Putative uncharacterized protein At1g22300.3	1043	2e-111
B9RJK9 14-3-3 protein, putative	947	3e-100
A1XJ43 14-3-3-like protein	944	6e-100

Arabidopsis top hits (Blast detail)	Score	e value
AT1G22300.1 GRF10 (GENERAL REGULATORY FACTOR 10); ATP binding / protein binding / protein phosphorylated amino acid binding	1053	8e-115
AT1G22300.2 GRF10 (GENERAL REGULATORY FACTOR 10); ATP binding / protein binding / protein phosphorylated amino acid binding	1052	1e-114
AT1G22300.3 GRF10 (GENERAL REGULATORY FACTOR 10); ATP binding / protein binding / protein phosphorylated amino acid binding	1043	1e-113
AT1G34760.2 GRF11 (GENERAL REGULATORY FACTOR 11); ATPase binding / amino acid binding / protein binding / protein phosphorylated amino acid binding	890	6e-096
AT1G34760.1 GRF11 (GENERAL REGULATORY FACTOR 11); ATPase binding / amino acid binding / protein binding / protein phosphorylated amino acid binding	889	8e-096

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


12	3			50%


11	2			33%


6	1			17%

Unigene Members	Member information