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Information for unigene UN14375
| FASTA Sequence |
| Unigene ID: UN14375 | Length: 886 |
SSR | | TTCTGCATATTGTTGTTACATTTTATTTACAGTTGAAGCAAATGATTATTTTCAATATTCCTAAAGAATTAAATAGTGTTTACAAA
TTTACAGAGTGATTTTTTTTTCTCCTCTATATGGAATGAACATCAATGGGTTTATATATATGGAAATGAAGTGCAAAGAAAGGTTG
ATTTGTAACACACACACAAGTCAAAGTCATCATCAAGGATCTGCTTTTCCAGCGATTTCATCGTTGTCATCCGAGTCTGAACCACG
TTCGCTCATGCTATCATCATCATCGTCATCTTCATCATCACTTAAATCCTCAGGTGCTCCTATGTCCTCTGGTTTAGCATATGCTT
TGCAGTACTCTTTGACTTTCTTCTCATAGGCTGCACGGTCTCGCATCAAGAGAGAGGCAGCTTCTCCATTGAATGGATCAGATGGG
TTTGGATATAGAAGCAGTTGAGGAAGAAATGACTCGAAGACATTGATAAGATCAAACATTGGGCTCCATGTCTGGTTTATTACATC
TAAGCAAACAGCACCCGAAGATTCATCAACATTGGGGTGATAAATCTTGTTAACGAAACCAACAGAAGGAGATTTGTAAGGATAAG
CTTCAGGAAGTTCGACTTTGATCTTCCATACACCTCCCTCATATAGACTGTTAGTGGGGCCATGGAAAGTAACATAGAACATCTGC
AAATCGTCGTTGACAGTATCCACCTTGTAATCACTCATCATCAATTTCATCATGTCCATCTCTCGGCGTTTGCTCGGCGAAGCCAT
GCCCCCCGATGATTCTTCTCCCTTCCTTCTTCTTCTTCTTCTTCTTCTTTCTAGATTCTGGTTTCAAAGAGAGAGAGAGAGAGAAA
AGATTCGAAAATGAATATTGTAATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002882046 ubiquitin-conjugating enzyme 6 [Arabidopsis lyrata subsp. lyrata] | 884 | 6e-093 |
| NP_566062 ubiquitin-conjugating enzyme E2 6 [Arabidopsis thaliana] | 833 | 5e-087 |
| XP_002868603 hypothetical protein ARALYDRAFT_493844 [Arabidopsis lyrata subsp. lyrata] | 751 | 2e-077 |
| NP_568589 ubiquitin-conjugating enzyme E2 4 [Arabidopsis thaliana] | 735 | 1e-075 |
| ABB47726 Ubiquitin-conjugating enzyme E2-23 kDa, putative, expressed [Oryza sativa Japonica Group] | 735 | 1e-075 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P42750 Ubiquitin-conjugating enzyme E2 6 | 833 | 2e-088 |
| P42748 Ubiquitin-conjugating enzyme E2 4 | 735 | 5e-077 |
| P16577 Ubiquitin-conjugating enzyme E2-23 kDa | 712 | 2e-074 |
| P42749 Ubiquitin-conjugating enzyme E2 5 | 708 | 7e-074 |
| Q9P7R4 Ubiquitin-conjugating enzyme E2 8 | 592 | 2e-060 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B8BH65 Ubiquitin carrier protein | 735 | 8e-076 |
| Q337R4 Ubiquitin carrier protein | 735 | 8e-076 |
| B4FFL4 Ubiquitin carrier protein | 733 | 1e-075 |
| A5B1R0 Ubiquitin carrier protein | 732 | 2e-075 |
| B9RDU4 Ubiquitin carrier protein | 730 | 3e-075 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G46030.1 UBC6 (ubiquitin-conjugating enzyme 6); ubiquitin-protein ligase | 878 | 1e-094 |
| AT5G41340.1 UBC4 (UBIQUITIN CONJUGATING ENZYME 4); ubiquitin-protein ligase | 740 | 1e-078 |
| AT1G63800.1 UBC5 (ubiquitin-conjugating enzyme 5); ubiquitin-protein ligase | 708 | 7e-075 |
| AT3G08690.1 UBC11 (UBIQUITIN-CONJUGATING ENZYME 11); ubiquitin-protein ligase | 253 | 4e-022 |
| AT1G64230.1 ubiquitin-conjugating enzyme, putative | 251 | 6e-022 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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