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Information for unigene UN14377
| FASTA Sequence |
| Unigene ID: UN14377 | Length: 464 |
| SNP | AGGGTAAAAACCATTTTTCTTTTATCATAATATAAGAAGCAAACATATGTATGGGGGAGACGCAAAGTTACTCTCCTAGGAACATG
ATAGAAGTTACACAACAAACGATTTATTTTGTTTTCCAAGTTGTTGATAAATATGCACTGTCAAAGACAGGCTACATGGATAAGAA
CGGAAATCATTTCTTGCCGCTCTTCTTAAGTCCAGAGCCTCCAAAAGATCCCTTCTGTGATGCCTTGGCTCTCAGTTCTTTAAGTG
CCTTTTCCTCGTCTTTCTTCTTCTGAAGGTTAGCCATATCGTGCTCGTCGTATTCCTTCTTATCAGCTTTCGGCTGCTTCAAAGGT
TTCGCCTTTCCTCCTTGCTTGGACGACATGACCGGTTTCTGGAGCTAGGGTTTGATGCTGCTTGTCTGAGAATTTGCGGAAAAGTA
GACTTTCAGACGACGGACTTTGTGTCTTCGATCC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_563969 translation machinery associated protein TMA7 [Arabidopsis thaliana] | 310 | 4e-027 |
| ACS96448 unknown protein [Jatropha curcas] | 297 | 1e-025 |
| NP_566533 Translation machinery associated TMA7 [Arabidopsis thaliana] | 294 | 3e-025 |
| XP_002862265 hypothetical protein ARALYDRAFT_920992 [Arabidopsis lyrata subsp. lyrata] | 291 | 6e-025 |
| ADK13061 conserved hypothetical protein 4 [Hevea brasiliensis] | 290 | 8e-025 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q4SUE2 Coiled-coil domain-containing protein 72 | 194 | 8e-015 |
| A1A4Q4 Coiled-coil domain-containing protein 72 | 192 | 1e-014 |
| Q9XZS3 Coiled-coil domain-containing protein 72 homolog | 192 | 1e-014 |
| Q9Y2S6 Coiled-coil domain-containing protein 72 | 192 | 1e-014 |
| Q8K003 Coiled-coil domain-containing protein 72 | 192 | 1e-014 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9XI42 F9L1.21 protein | 310 | 2e-027 |
| D2D964 Putative uncharacterized protein | 297 | 8e-026 |
| Q1EBS5 At3g16040 | 294 | 2e-025 |
| A9NJV8 Putative uncharacterized protein | 288 | 9e-025 |
| B9RQP3 Coiled-coil domain-containing protein, putative | 288 | 9e-025 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT1G15270.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation machinery associated TMA7 (InterPro:IPR015157); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16040.1); Has 263 Blast hits to 263 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 48; Plants - 41; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). | 311 | 2e-029 |
| AT3G16040.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Translation machinery associated TMA7 (InterPro:IPR015157); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15270.1); Has 264 Blast hits to 264 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 48; Plants - 41; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). | 295 | 2e-027 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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