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Information for unigene UN14388

FASTA Sequence
Unigene ID: UN14388Length: 998  SNP
TTTTTTTTCTCTGTTCCCGATCTTCCACAGGGGGAATAGTATCTGAGAAACTGCCAAAATGAGTAAGCTCCAGAGTGAAGCCGTGA
GAGAGGCGATATCCTCCATCATCACTCATTGCAAGGAGACAAAGCCACGCAAGTTCACTGAGACCATCGAACTCCAGATTGGTCTT
AAGAACTATGACCCACAAAAGGACAAGCGGTTTAGCGGATCCGTTAAGTTGCCTCACATTCCGAGGCCCAAAATGAAGATTTGCAT
GCTCGGTGACGCTCAGCACGTTGAAGAGGCTGAGAAGATTGGGTTAGACTCTATGGATGTTGAAGCTCTTAAGAAGTTGAACAAGA
ACAAGAAACTTGTTAAGAAGCTCGCCAAGAAGTTCCATGCTTTCCTTGCTTCTGAATCTGTCATTAAGCAGATTCCTCGTCTTCTT
GGTCCTGGTCTCAACAAGGCAGGAAAATTCCCAACTCTTGTTAGCCACCAAGAGTCTTTGGAATCCAAGGTGAATGAGACAAAGGC
AACAGTTAAGTTCCAGCTGAAGAAGGTTCTGTGCATGGGTGTCGCTGTTGGGAATCTCGGCATGGAAGAGAAGCAGATCTTTCAGA
ACGTTCAGATGAGCGTCAACTTCCTTGTTTCGCTCTTGAAGAAGAACTGGCAAAACGTGAGGTGCTTGTACTTGAAGAGCACAATG
GGTCCACCAAACCGTGTTTTCTAAGATGTTCTTATTCTCTGAAGGTGTCGTCAGCAGACGGATAGAAAAGTTGATTTTCTTTCCAG
TCATGAGCCTTCTTCTTCTTGGATTAGTTCCTGAATCTTTACTTTGTAGGATCAAGATTTTGTTGAAAGACAGTTTTGTTTCTGTT
ATTATTAGTGGGATTTTCTCTATTTTAATTATTTCGTGACGACACATCATTTAAAGGTTAGTCTTGGGTGAATGTGACAAATTAAA
CGGTCTTCTTGTCATGACATTCTTCAATATCAACCAAACATGATTATTACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_197636 60S ribosomal protein L10a-3 [Arabidopsis thaliana]10882e-116
NP_563813 60S ribosomal protein L10a-1 [Arabidopsis thaliana]9985e-106
XP_002889688 60S ribosomal protein L10A [Arabidopsis lyrata subsp. lyrata]9976e-106
BAD09090 putative 60S ribosomal protein L10A (RPL10aC) [Oryza sativa Japonica Group]9904e-105
ABK22290 unknown [Picea sitchensis]9861e-104

Swiss-Prot top hits (Blast detail)Scoree value
P59231 60S ribosomal protein L10a-310887e-118
Q8VZB9 60S ribosomal protein L10a-19982e-107
P59230 60S ribosomal protein L10a-29821e-105
Q9VTP4 60S ribosomal protein L10a-27671e-080
Q963B6 60S ribosomal protein L10a7581e-079

TrEMBL top hits (Blast detail)Scoree value
Q6ZJ04 Ribosomal protein9903e-105
A9NNS9 Ribosomal protein9868e-105
C6SVL1 Ribosomal protein9795e-104
B7F845 Ribosomal protein9779e-104
B8B9K6 Ribosomal protein9779e-104

Arabidopsis top hits (Blast detail)Scoree value
AT5G22440.1 60S ribosomal protein L10A (RPL10aC)10895e-119
AT5G22440.2 60S ribosomal protein L10A (RPL10aC)10895e-119
AT1G08360.1 60S ribosomal protein L10A (RPL10aA)10044e-109
AT2G27530.1 PGY1 (PIGGYBACK1); RNA binding / structural constituent of ribosome9883e-107
AT2G27530.2 PGY1 (PIGGYBACK1); RNA binding / structural constituent of ribosome9883e-107

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  15%
 
65  38%
 
123  23%
 
82  15%
 
111  8%

Unigene MembersMember information