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Information for unigene UN14393
| FASTA Sequence |
| Unigene ID: UN14393 | Length: 1319 |
SSR | | GGAACAAATACGCGACGACGACGAAGAAGACAAACACGAAGGAAGAAGAGAATCAATCTCACACGAAATTACACAACAATAATAAT
AGTTAGTTATTTAAAAGATTTTATAAATAAAACTCCAAAGCTTCTCTGTAACTACTACTCTCGTCTTCAATGTTTATCATTTAGAT
CTTGAGAGAGAGAGAGAGAGAGAGACAAAAATCGAAAATCAAAATCATGGCGGCGAAATCGAAGAACAACCTTCGTTACCAACTGC
GAAAATCATCATCGCGATCCACACAAGCGTTCACGGTGCTGATCGGTCTGCTGGTGGTGCTTATGATACTTCTGGGTCTGGGGATC
TTATCACTCCCCAATGCCAACAGAAACTCATCCAAGCCCAACGATTTGACCAACATTGTACGGAAGAGCCAGGATGAGAGTAATGG
AGGAGAGGAGGAAGGGAACGGAGAGCGTTGGGTTGAAGTGATATCGTGGGAGCCTAGAGCTGTTGTTTACCACAATTTCTTGACCA
ATGAAGAATGTGAGCACCTCATCAGTCTCGCTAAACCCAACATGGTTAAGTCAACTGTGGTCGATGAGAAAACTGGTGGCAGCAAA
GACAGCAGAGTAAGGACTAGCTCTGGGACTTTTCTTAAAAGAGGACATGACCAAGTTGTCGAGAGGATTGAGCAAAGGATTTCTGA
TTTCACCTTCATTCCTGTTGAAAATGGAGAAGGTCTTCAGGTTCTTCACTACCAAGTTGGACAGAAGTATGAGTCTCACTATGATT
ATTTCTTAGATGAGTTCAACACCAAGAACGGAGGACAACGAATAGCCACTGTTCTTATGTACCTCTCGGATGTTGATGATGGTGGC
GAGACCGTGTTCCCAGCAGCAAAAGGAAACATTAGTGCAGTCCCATGGTGGGACCAGCTCTCCAAATGTGGCAAAGAAGGACTCTC
TGTTCTACCAAAGAAGAGAGATGCTTTACTTTTCTGGAACATGAGACCTGATGCCTCTCTAGACCCTTCCAGTTTGCACGGTGGAT
GCCCAGTGGTGAAAGGAAACAAATGGTCATCCACGAAATGGTTCCACGTCCATGAGTTCAAGGTTTAAGAAAAATAAGATAAGAGG
AGGTTTACACGACAGCACAGTTACAAACAGATGTATTGTTGTATTTCCCTTTTCAAGTGAGAAATGATCTTTAGGCTGTGTTTTAT
CATGAGCGATATTTGAACTTTTTCTTTTAAACTATTTGAGATTTTTGTAACTTTACATGTTCTGTTTTTATAACATCAATAATTTA
ATACAACCACGCACTGGTTTAAGACTGGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_179363 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein [Arabidopsis thaliana] | 1403 | 8e-153 |
| AAM65040 putative prolyl 4-hydroxylase, alpha subunit [Arabidopsis thaliana] | 1397 | 4e-152 |
| XP_002884079 oxidoreductase [Arabidopsis lyrata subsp. lyrata] | 1390 | 2e-151 |
| XP_002869059 oxidoreductase [Arabidopsis lyrata subsp. lyrata] | 1226 | 3e-132 |
| NP_195306 oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] | 1190 | 4e-128 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P54001 Prolyl 4-hydroxylase subunit alpha-1 | 256 | 3e-021 |
| Q5ZLK5 Prolyl 4-hydroxylase subunit alpha-2 | 252 | 9e-021 |
| Q60716 Prolyl 4-hydroxylase subunit alpha-2 | 247 | 4e-020 |
| Q60715 Prolyl 4-hydroxylase subunit alpha-1 | 246 | 5e-020 |
| P16924 Prolyl 4-hydroxylase subunit alpha-1 | 244 | 8e-020 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q24JN5 At2g17720 | 1403 | 5e-153 |
| Q8LB05 Putative prolyl 4-hydroxylase, alpha subunit | 1397 | 3e-152 |
| C6TM81 Putative uncharacterized protein | 1062 | 2e-113 |
| A5AE53 Putative uncharacterized protein | 1059 | 4e-113 |
| B9SXB7 Prolyl 4-hydroxylase alpha subunit, putative | 1051 | 3e-112 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G17720.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 1413 | 2e-156 |
| AT4G35810.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 1190 | 1e-130 |
| AT5G66060.1 iron ion binding / oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1095 | 1e-119 |
| AT1G20270.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 999 | 2e-108 |
| AT3G06300.1 AT-P4H-2 (A. THALIANA P4H ISOFORM 2); oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors / procollagen-proline 4-dioxygen | 616 | 5e-064 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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