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Information for unigene UN14398
| FASTA Sequence |
| Unigene ID: UN14398 | Length: 2717 |
SSR | | AGGGGAAAAGAAACCTGAAACCCACCCATCAGAGAGAGAGAGAGAGAGAGAGATCCGAGATTTAGAGAGAAGAGAGAATGATCGCA
GACGGATCAGGAGAAGACGAAGAGAAATGGCTCGCCGCCGGCGCTGCGGCTTTCAAGCAGAACGCATTTTACATGCAACGCGCTAT
TGATTCGAATAATCTGAAAGATGCTCTCAAGTACTCGGCTCAGATGCTTAGCGAGTTGCGGACTTCGAAGCTTTCGCCTCACAAGT
ACTATGACCTCTATATGAGAGCTTTTGATGAGTTGAGGAAGCTTGAGATTTTCTTCATGGAGGAAACTCGGCGTGGCTGCTCCGTC
ATTGAACTCTATGAGCTTGTTCAGCATGCTGGTAACATATTACCACGCTTATATCTCCTGTGTACAGCAGGATCCGTTTATATCAA
AACCAAGGAAGCTCCTGCCAAGGAAATTCTTAAGGATCTTGTTGAGATGTGCCGTGGGATTCAGCATCCTCTACGTGGTCTCTTCT
TGAGAAGTTACCTTGCGCAAATTAGTCGAGATAAATTACCTTATATTGGTTCTGAGTATGAAGGAGATGCTGATACAGTCACGGAT
GCGGTGGAGTTTGTACTACTGAACTTTACCGAGATGAATAAACTTTGGGTCAGAATGCAACACCAGGGACCTGCTCGGGAAAAGGA
TAAACGGGAGAAAGAGAGGAGTGAGCTTCGTGACCTTGTTGGAAAGAACCTTCATGTGCTGAGCCAGTTAGAAGGTGTAGACCTTG
ATATGTATAGAGATACAGTTCTTCCTAGAGTCTTAGAGCAGATAGTGAACTGCCGAGATGAGATTGCCCAATATTACCTAATGGAC
TGTATCATTCAAGTCTTCCCCGACGAGTATCACTTGCAGACTCTTGATGTACTTCTTGGGGCTTGTCCACAACTTCAGCCGTCGGT
TGACATTATGACAGTGCTTTCACGTTTAATGGAGAGGCTGTCAAGTTATGCTGCCTTAAATACTGAAGTTTTACCTTATTTCCTGC
AAGTGGAAGCTTTCTCAAAGTTGAATAATGCAATTGGAAAGGTAATAGAAGCACAAGAAGACATGCCTATTCTGAGTGCAGTAACC
CTGTATTCTTCGCTTCTCAAGTTTACTCTTCATGTTCACCCTGATCGGCTTGATTATGCGGACCAAGTGTTGGGATCATGTATTAA
GCAATTGTCTGGAAAAGGAAAGATTCATGACACCCGTGCAACAAAGGAGCTTGTCACCCTTTTAAGTGCTCCTCTAGAGAAGTATA
ACGATGTTGTTATCGCCCTTAAACTAACAAACTATCCCCTTGTAATGGAGTACCTTGATAGCGAGAACAAGAGAGTAATGGCTACG
GTTATAATTCGAAGCATTATGAAAAACAAGACTGTAATTGCTACAGCAGAGAAGGTTGAAGCATTGCTTGAACTGATCAAAGGACT
TATCAATGACCTGGATGAGCCTCAAGGTCTTGAGGTTGATGAAGATGACTTTGAGGAGGAGCAAAATTCTGTTGCGCGTCTCATTC
ACATGTTATATAGTGATGATCCGGAAGAGATGTTTAAGATTATCAATGTCCTCAAGAACCATCTCCTGACAGGAGGGCCAAAGCGC
TTAAAGTTCACCATTCCACCCCTGGTTGTGTCTGCTCTGAAGCTAATCAGGCGGTTGCCAGAGGAAGGATACAATCCTTTCGGAAA
AGAGGCTTCGGTGTCTGCTACTAAAATTTTCCAATTTCTAAATCAGATTATTGAAGCGCTCCCTAGTGCTCCATCATCACCTGACT
TGGCATTCCGATTGTACTTGCAATGTGCTGAGGCTGCGAATAAGTGTGATGAAGAGCCAATTGCATATGAATTTTTCACCCAAGCA
TACATCTTATACGAAGAAGAAATTTCGGACTCAAAGGCCCAGGTGACCGCTTTACAACTTATAATTGGAACTCTGCAAAGGATGCA
CGTATTCGGTGTTGAGAACAGAGATACTTTAACACATAAGGCCACAGGGTATTCCGCAAAACTTCTAAAGAAACCCGACCAGTGTC
GAGCTGTTTATGCCTGCTCTCATCTGTTTTGGCTCGAAGATCATGGACCATACAAGATGGAGAAAGGGTTCTGCGTTGTCTCAAAC
GAGCGCTTAAAATTGCAAATTCAGCTCAACAAATGACCAGCGCAGCTCGGGGTAGTACAGGATCTGTTACCCTCTTCATCGAGATA
TTAAACAAGTACCTCTATTTCTTTGAGAAAGGGATTCCACAAATCACAGTTGAATCAGTGGAGAGCATGATCCAACTGATCAAGAA
CGAAGAATCGTTGACATCAGACCAATCTGCCGAATCCTTCTTGGCAAGTACGCTTCGGTTCATGGAGTTCCAGAAGCAGAAAGGCG
GTGTCGTTGGTGACAGATACGAGCAGGTCAAAGTATAGAATATCATATTGGTAACAAGAGTTTGTTTTGAAACCCCTTTTGGTTGG
GTCTCTGAGAAATCATAAGGGACTCTGTGTGTGTTAATTGCTGCTCTGAAATGTATACCCGGTTTAGGTCTGGTTTATTCCTCGGA
TTTTTGAAGGTTTGTAACTTGTGGAGTTTGCAGTGTTTATAAGAATCTTACTTGATCACTGGTGAGTAAACCCAGTTCAGCATGGG
ATATTGGATGAGGTTCTCATACAATACATAGATGTTTTTTTTTTTTCCTAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002884085 hypothetical protein ARALYDRAFT_480677 [Arabidopsis lyrata subsp. lyrata] | 3259 | 0.0 |
| NP_179370 protein VPS35A [Arabidopsis thaliana] | 3238 | 0.0 |
| XP_002531161 vacuolar sorting protein, putative [Ricinus communis] | 2831 | 0.0 |
| CBI17331 unnamed protein product [Vitis vinifera] | 2791 | 0.0 |
| XP_002262862 PREDICTED: hypothetical protein [Vitis vinifera] | 2790 | 5e-313 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9EQH3 Vacuolar protein sorting-associated protein 35 | 1480 | 9e-163 |
| Q2HJG5 Vacuolar protein sorting-associated protein 35 | 1476 | 3e-162 |
| Q96QK1 Vacuolar protein sorting-associated protein 35 | 1473 | 6e-162 |
| Q54C24 Vacuolar sorting protein 35 | 1456 | 6e-160 |
| P34110 Vacuolar protein sorting-associated protein 35 | 721 | 9e-075 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q7X659 Putative vacuolar sorting protein 35 | 3238 | 0.0 |
| B9SYU2 Vacuolar sorting protein, putative | 2831 | 0.0 |
| A2XN04 Putative uncharacterized protein | 2696 | 1e-302 |
| C5WX27 Putative uncharacterized protein Sb01g004840 | 2690 | 7e-302 |
| B6U2K5 Vacuolar protein sorting 35 | 2687 | 2e-301 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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