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Information for unigene UN14410
| FASTA Sequence |
| Unigene ID: UN14410 | Length: 1547 |
SSR | | ATGCTCTCTCGTTTATCCAGAGATCTTCGAATCTCCGTCTCGCAACCCTAGTTTCTTCCAAATCCAACTCTCAGATCTTCTCCTCC
TTCATCCGCCCGCTTTCCACCAACAGTAGCGGCGGCGGCGGCGGAGGAGGAGGAGGAAATGGCAGCGGGAACGACACTCCGTGGAG
TTTTTCAGGAGTGAAGGATGAAAAGTCAGATCCTTTCTCTTCGAACGATTCTTGGGGTTGTGAGGACGGGAAATGGGCTGCCAAGG
AGGAGCCTAAGCGATGGAATATGAAGGAGGAAGGAGGAGATGAGAAAGGCGTGTTCGGTGGTACCGAAGGCGGAGAGGCGGCTAAT
GGTGGTTTTGGAGATGTGAAATCAAGTGGATGGGATGTGTCCTCTAAGCCGTGGGATTTGAAGGATGAGGATAAGATCGTGTTTGA
TACAAGTGCCGAGATGCCTGCTAGCTTTGATGACAGCTTAGTCAATGAGGAAGAAGAGCGTGCCAAGAAGGAAGTGTTTCAAAAGG
AAGAGAAAGAGCTCACTGAGGTTATCAAAGGTCCTGATAGAGCATTTGGAGACTTGATAGCAAAGTCTGGTATAACAGATGAAATG
CTAGATAGTCTGATAGCCTTGAAGGATTTCCAAGGGGTCCAAGGGTTACCTCCTCTGACTGAGATTGAGAACCTGCGGCGTGAGAA
GAGTTCTAAGAAGTCGTCAAGAGCTGAGATTGAACTCCAGATGCAAGAGGAGATTGCCAAGTCGAGGGTCAGACAAGTGGATGAGA
CTGGGAGAGCATACGGAACCGGGAGAAGAAAATGCAGCATCGCCCGTGTTTGGATTGTCCCTGGCAAAGGAAAGTTCCTTGTTAAC
GACAAAGAGTTCGATGTCTATTTCCCTATGCTTGATCACCGTGCCGCTCTTCTGCGCCCGCTTGCTGAAACCAAAACCTTAGGTAG
TTGGGATATTAACTGCACTGTTAATGGCGGTGGAACTACAGGTCAAGTTGGAGCTATTCAATTGGGTATCAGCAGGGCATTGCAAA
ACTGGGAACCAGATATGCGGACAGCACTTCGAGCTGCTGGTTTTTTGACAAGAGACTCGAGAGTTGTGGAAAGGAAGAAACCTGGA
AAAGCCAAGGCAAGAAAGAGTTTCCAGTGGGTCAAACGTTAAATCCATTCGATATCTTTCTCTTTCTCTATGTCTTCATTTTCATT
GGTTCATCTTTACTTATACCGGGTTTGGAAGAATCACCGGATGATAACTTGTTCTTTTGGTCCGGTTTCTTAGTCTTTCTTGCACC
AACACATTACTCTACTACGACTCTTGAGTCTTGGAAACTTGAGTTACGTTTGGTTTGTGAGTCAGGACACATAATTTGTATGTTTT
TGTTCCTGTTTCTTCAAAAGGTGCATTGATAATGATCAACATATATGATGTTTTCACTTTGACATTATGATTAGAAAAGAGTAGAA
GCGTTTCTAGTGATAGTTGACAATCTATGGCTTTGAATCTCCGGAGTGTTATCGATCTGTTCTGTTCTAAAACAAATGAAGGAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_190477 small subunit ribosomal protein S9 [Arabidopsis thaliana] | 1272 | 1e-137 |
| BAD44424 hypothetical protein [Arabidopsis thaliana] | 1265 | 1e-136 |
| XP_002877645 ribosomal protein S9 family protein [Arabidopsis lyrata subsp. lyrata] | 1260 | 4e-136 |
| XP_002513668 ribosomal protein S9, putative [Ricinus communis] | 1004 | 2e-106 |
| XP_002274146 PREDICTED: hypothetical protein [Vitis vinifera] | 945 | 1e-099 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q1QKK3 30S ribosomal protein S9 | 394 | 4e-037 |
| Q3SSQ8 30S ribosomal protein S9 | 393 | 5e-037 |
| Q6G3I7 30S ribosomal protein S9 | 391 | 9e-037 |
| Q2IWN6 30S ribosomal protein S9 | 391 | 9e-037 |
| Q6N650 30S ribosomal protein S9 | 387 | 3e-036 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8L6Z4 At3g49080 | 1272 | 1e-137 |
| Q67Y07 Putative uncharacterized protein At3g49090 | 1265 | 6e-137 |
| B9RIU9 Ribosomal protein S9, putative | 1004 | 1e-106 |
| A5AZM9 Putative uncharacterized protein | 945 | 8e-100 |
| B8B5I5 Putative uncharacterized protein | 877 | 6e-092 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G49080.1 ribosomal protein S9 family protein | 1273 | 4e-140 |
| AT1G74970.1 RPS9 (RIBOSOMAL PROTEIN S9); structural constituent of ribosome | 239 | 3e-020 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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