Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN14415

FASTA Sequence
Unigene ID: UN14415Length: 894 SSR 
GGACATTTTCTTTACACTGAACCATCACTCCGAGAGTGCGCTTCACACAATAAACAAACAAACAAACAAACAAAAAAAATGGCTAG
ACAATTTGCCATTGTTGCGATCTGCATCGTCCTCATCGCCGGCGTCGGAGGTCAAGCTCCGTCGTCACCACCAACCACAACACCAG
CACCACCCACTACAACAACTCCACCACCAGCAGCGACCCCTCCTCCCGTCTCAGCTCCTCCACCAGTCACAACTTCTCCTCCTCCA
GCCACTCCTCCTCCGGTCGCAACTCCTCCTCCAGTCGCAACTCCTCCCCCCGTCGCAACTCCTCCTCCAGCAACTCCCCCTCCCGT
CGCATCTCCTCCTCCAGCAACTCCTCCACCCGTCGCAACTCCTCCTCCAGCAACCCCTCCTCCAGCTCCTCTTGCATCTCCTCCAG
CTCAGGTTCCAGCTCTTGCTCCTACTAAGCCAGACGCTCCTACTGTATCTCCCTCGTCTAGCCCTCCTTCCCCAGCGACTGATGGT
CCTGGACCAAGCACCAGTGAGCTCTCTCCAGGACCTTCCACAGGTCCCAATGACCAGAGTGGAGCAAGCAAGACGGTTTCAAGCTT
GGTACTTGGATCTGTTCTCGTTTGGTTTATGATCTAAGCGCGGGAGCCTTTCGCTCGGTGTTCCTTGCATTTATTTTCATGTTGAT
GTTTGTTTGTTCCATTGTTATTATACTTTCGGAACCGTATTCTTTTGGATTATTATCTTTTGGAGAGGATATTGTTGAGATGGAGA
TATCAGGATATTTCGTTTGGAGATAATTTGTGGCTTTCCTTCTCATTCTATTTGATTATTAGTGTACTACATTGCTTTCTCTTCCG
TGTCTACCATTCCTTATATATTTGCTCTTTTCTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_179095 arabinogalactan protein 9 [Arabidopsis thaliana]7592e-078
AAG40020 At2g14890 [Arabidopsis thaliana]7502e-077
XP_002883867 predicted protein [Arabidopsis lyrata subsp. lyrata]7475e-077
NP_973463 arabinogalactan protein 9 [Arabidopsis thaliana]6722e-068
BAH56748 AT2G14890 [Arabidopsis thaliana]4941e-047

Swiss-Prot top hits (Blast detail)Scoree value
Q9C5S0 Classical arabinogalactan protein 97599e-080
Q9T0K5 Leucine-rich repeat extensin-like protein 33054e-027
Q9FPQ6 Vegetative cell wall protein gp12956e-026
Q1HVF7 Epstein-Barr nuclear antigen 12921e-025
Q9ZT16 Classical arabinogalactan protein 42769e-024

TrEMBL top hits (Blast detail)Scoree value
Q3EC03 Uncharacterized protein At2g14890.26722e-068
C0Z219 AT2G14890 protein4947e-048
A9P9Z1 Predicted protein4769e-046
C0Z3D3 AT2G14890 protein4688e-045
Q4A2B5 Putative membrane protein3567e-032

Arabidopsis top hits (Blast detail)Scoree value
AT2G14890.1 AGP9 (ARABINOGALACTAN PROTEIN 9)7606e-081
AT2G14890.2 AGP9 (ARABINOGALACTAN PROTEIN 9)6721e-070
AT4G13340.1 leucine-rich repeat family protein / extensin family protein3054e-028
AT1G44191.1 Encodes a ECA1 gametogenesis related family protein2947e-027
AT3G19430.1 late embryogenesis abundant protein-related / LEA protein-related2883e-026

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  29%
 
123  43%
 
111  14%
 
91  14%

Unigene MembersMember information