 |
Information for unigene UN14417
| FASTA Sequence |
| Unigene ID: UN14417 | Length: 1474 |
| SNP | GGACATATCACTAACAAAAATACAAAACTTTAGCTTCAGTTTCTTTGTGTTACGTCTCCGACCAGAAAAAAAAGATGGGTGAAATC
GGTGCCAAGCGATGGAACTTCGGAGCCAACGTGGTGGTCGAACGTTCAAGCTCCCTAAGCATTCGTGAGTATCTTAATACCTTAAT
CAGTAATCTCAACGAAGGTGACACCAGACCCGTCATCGCCTTTGGAAATGGCGACCCTTCTCTGTTCCCGAGATTCAGTACTGATC
CATCAGCCGTTAAAGCCATATGTGATGCTGTTAGTTCCAACAAGTTTAACAACTATGCTTCTGCTTCCGGTATTCCTGTCGCTAGG
AAAGCCGTTGCAGAGTACCTTTCTCGCGATCTCTCTTACCAGATATCTCCAAAGGATGTTCATATTACTTCTGGTTGTTTGCAAGC
CGTTGAGATTTTGATCTCCTCACTCGCGAAACCTGGTGCCAACATTCTGCTGCCTAGGCCCACTTACCCTATGTATGATTCCAGAG
CGTCTTTCAGTCAGCTAGAGATTCGTTATTTCGACCTCCTACCAGAAAATGGTTGGGATGTTGATCTCGATGCTGTTGAAGCTCTT
GCGGACGACAAAACCGTAGCTATAGTTGTTGTCAACCCTTGCAATCCGTGTGGAAACGTTTTTTCTCGCCAACATCTTCAAAAGAT
TGCAGAGACAGCTTGCAAGCTTGGAATACTTTTGATCGCAGACGAAGTTTATGATCATTATGCATTTGGGGATAAACCATTTGTGT
CCATGGCAGAGTTTGCAGAGATAGTGCCTGTAGTTTTGTTAGGCGCCATATCAAAAAGATGGTTTGTTCCTGGCTGGAGACTTGGC
TGGATGGTGACTCTTGACCCTCATAGCATCATGAAAGATTCTGGGTTTCTTCAGTCTCTTACCAACGTCATCAACATTTCGACGGA
CGCTGCAACGTTCATTCAGGGTGCCATTCCTGATATCCTTGGGAATACGAAAGAAGAATTCTTCTCATTGAAACTTGAAAGGGTGA
GAGAATGTGCAGAGATTTGTTATGAAGAGATTATGAAGATCCCTTGCATCACTTGCCCCAGCAAACCCGAGGGATCAATGTTCACG
ATGGTGAAGTTAAACCTCTCGCTACTCGGAGATATCAGTGATGATTTGGACTTCTGCTGCAAGCTGGCTAAAGAGGAATCGTTGAT
CATCCTACCAGGTCGAGCTGTTGGGCTCAAGAACTGGCTACGTATCACTTTTGCTGTTGAGCTCGATCTCCTCATTGACGGCTTTT
CCAGGCTAAAGAACTTTGCCCAGAGACACTCCAAGAAAAACCCATGAGTGTTAAGTCTCTCTCTCCTTCTCAATAGTCAAAGCAAT
TTCTTGCTTAGAAACTTCAAACTTCTAAAACAAGACATTGTAATAACTAGTAAGCTTTGTTTTTCTTTGAACAAAAATATGAACCA
AGTGATGCCAAG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_198465 tyrosine aminotransferase [Arabidopsis thaliana] | 1890 | 3e-209 |
| XP_002870469 hypothetical protein ARALYDRAFT_493655 [Arabidopsis lyrata subsp. lyrata] | 1884 | 1e-208 |
| ADZ24703 tyrosine aminotransferase 2 [Solanum pennellii] | 1349 | 2e-146 |
| XP_002276551 PREDICTED: hypothetical protein [Vitis vinifera] | 1338 | 3e-145 |
| XP_002328045 aminotransferase family protein [Populus trichocarpa] | 1336 | 5e-145 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q58CZ9 Tyrosine aminotransferase | 680 | 3e-070 |
| Q8QZR1 Tyrosine aminotransferase | 680 | 3e-070 |
| P04694 Tyrosine aminotransferase | 671 | 3e-069 |
| P17735 Tyrosine aminotransferase | 664 | 2e-068 |
| Q54K95 Tyrosine aminotransferase | 616 | 7e-063 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LVY1 Tyrosine aminotransferase-like protein | 1890 | 2e-209 |
| B9MYE9 Aminotransferase family protein | 1336 | 4e-145 |
| B9MYF0 Aminotransferase family protein | 1315 | 1e-142 |
| A2X3T3 Putative uncharacterized protein | 1275 | 4e-138 |
| Q6K5U4 Os02g0302700 protein | 1272 | 9e-138 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G36160.1 aminotransferase-related | 1891 | 8e-212 |
| AT5G53970.1 aminotransferase, putative | 1161 | 4e-127 |
| AT2G20610.1 SUR1 (SUPERROOT 1); S-alkylthiohydroximate lyase/ carbon-sulfur lyase/ transaminase | 1104 | 2e-120 |
| AT4G28420.2 aminotransferase, putative | 1099 | 6e-120 |
| AT4G28410.1 aminotransferase-related | 1013 | 5e-110 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
