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Information for unigene UN14425
| FASTA Sequence |
| Unigene ID: UN14425 | Length: 1335 |
| SNP | GGACGTTCATCTCATTCAAAATCTTCAATCATTGTTTTTTTTCCAGTCTCCTTTTTTTGATTTCTTGCCCCCATCGAATGAGCCAA
ATAAAAACCATCCACAATCCCATTGGGTCAATAGAGAGATTTTTGGATCTTCTCTTGATCTCTCTCATCGTTTACATGACACTTAA
AGGCGGCACGAGTGGTGCATGTGCTGCGTGCAAGTACCAACGCAGACGCTGCGCCGCGTACTGCCCACTCGCACCCTACTTTCCAG
CCGAACAACCAAAGCTCTTCCAAAACGTTCATAGGCTTTTCGGCGTTAGAAGCATCGTTAAAATACTCGAGAACCTCGACGAAGTT
CAGAGACCAGAAGCGATGAAATCAATTATATTTCAGTCTTACGTCCGAGATCGTAACCCTGTCCACGGTTGCCTTGGGATCACGCA
ACAGCTTCAATACATGATATGGGTCGCCGAGGAAGAGCTCAAAGCCGTGAATTCTCAATTACAGCTCTATCGTAACGGTCAGAATC
ACCCTAACCCTCATAATATGATGATTCACGAGATTGGTGAGAAGCAAGAAGATCTCACGTCGCAGCTTGATTTGGGAATGGGACTT
CCGGTTAACACTAACCAAGGCAATACCATACCGTTTTTCAGTCCGGTTTCTGAAACACAGCAGCTACAACAACCTCAGCATATGTC
TTATTGTAGTGAGGTTAATAACAACCATGACTACAATCCCACTCCAGACACGTGTAAGGAAGTTCTCAATAATCATAATAATAACA
CTTCTTTGGCTTGGGGTCAGAATCAATTTCCTTATAATCATCATCATAACTATGGATTCATGAATCAAAACGAGCATTGTAGCGAG
ACGAAGAACAATAACAGTGTGATGGCTATACAGTCTCAACTTGTTAATCTTCAGATGGCATCGAATCAACAAGAGGAAGAAGTTGA
TGTTCACAACTATGATGAAATCCATCAGTTCCTCGAAATCATCGATGAGAGTCAATCTTTCACGGAAACGAAAGAAGTGTACGCTT
CAAGCTCTGGTGAATCTTCGAAGGAACCTATAGATGAAATAGGGGAGAAGGAGTTAAGGAGGGCGGCAACTTGCTTTAGTCTCACG
AGTGTGAATTGATACTCAATGTTGATCATGGGGACTAATCTTTTTCTTCTTCAAATTTTGATTTGTCTTAATTGTGTTTTCAGTTA
TTATTGATCCCAACGCCTTGTTTAAGCGTTGAACCTTTATTTCTAATAATTTTTGAATGTTTATTTATCATTGCTTCTTATGTTTT
TTTTTCAATATTTATATTTGTCATTTAAATTTTGGGCTCTCTCGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002877582 hypothetical protein ARALYDRAFT_347883 [Arabidopsis lyrata subsp. lyrata] | 1224 | 4e-132 |
| NP_190371 LOB domain-containing protein 27 [Arabidopsis thaliana] | 1042 | 6e-111 |
| XP_002317998 predicted protein [Populus trichocarpa] | 442 | 2e-041 |
| XP_002511502 LOB domain-containing protein, putative [Ricinus communis] | 417 | 2e-038 |
| XP_002321540 predicted protein [Populus trichocarpa] | 413 | 5e-038 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9STS6 LOB domain-containing protein 27 | 1042 | 2e-112 |
| Q9LRW1 LOB domain-containing protein 22 | 344 | 2e-031 |
| O04479 LOB domain-containing protein 6 | 252 | 1e-020 |
| Q8L5T5 LOB domain-containing protein 15 | 248 | 3e-020 |
| Q9SHE9 LOB domain-containing protein 4 | 248 | 3e-020 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9I320 Predicted protein | 442 | 1e-041 |
| B9R927 LOB domain-containing protein, putative | 417 | 1e-038 |
| B9IEH6 Predicted protein | 413 | 3e-038 |
| A5BJA0 Putative uncharacterized protein | 374 | 1e-033 |
| A9SXS6 Predicted protein | 328 | 2e-028 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G47870.1 LBD27 (LOB DOMAIN-CONTAINING PROTEIN 27) | 1042 | 2e-113 |
| AT3G13850.1 LBD22 (LOB DOMAIN-CONTAINING PROTEIN 22) | 344 | 2e-032 |
| AT1G65620.1 AS2 (ASYMMETRIC LEAVES 2); protein binding | 252 | 8e-022 |
| AT1G65620.2 AS2 (ASYMMETRIC LEAVES 2); protein binding | 252 | 8e-022 |
| AT1G65620.3 AS2 (ASYMMETRIC LEAVES 2); protein binding | 252 | 8e-022 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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