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Information for unigene UN14434
| FASTA Sequence |
| Unigene ID: UN14434 | Length: 901 |
| SNP | GGAGACGCAGATCTGTGAGATCTAGAGGAAGAAGACGAAGAAGCAGCAGCAAATGGCATCATCCATGGCGGCAGGACCAGATCACC
TCTTTAATCTGAGAAACAGTTTTTACCTAGGTGCGTATCAAGCGGCGATCAACAACAGCGAGATCCCTAATCTTTCGCAGGAAGAT
ATCATCGAGCGCGATTGCCTCGTCCACCGCGCTTACATCGCTCTTGGTAGCTACCAGCTTGTCATCAATGAGATCGACGAAGCGTC
GGCTACTCCTCTTCAGGCAGTGAAGCTCCTCGCTATGTATCTATCGAGCCCTGAAAATAAGGAATCAACGATTGCTAGCTTGAGGG
AATGGTTGGCAGATCCAACTGCTGGAAACAATGCTACTGTTAGGTTGATTGCTGGTACTATCTTCATGCATGAGGAAGACTATAGC
GAGGCTCTCAAGCACACTCATTCTGGAGGAACTATGGACCTGCATGCTTTGAATGTCCAGATATTCATAAAGATGCACAGGTCAGA
TTATGCTGAGAAACAGCTGAGAGTGATGCAACAGTTTGATGAAGACCACACACTCACTCAACTCGCCAGTGCATGGTTGAACCTGG
CAGTAGGGGGTTCCAAGATACAAGAAGCTTATCTAATCTTCCAGGATTTCTCTGAGAAGTACCCAATGACAAGCTTGATCTTGAAC
AGCAAGGCGGTTTGTTGCATGCATATGGGTAACTTTGAAGAAGCTGAGACTCTTCTGCTTGAAGCACTCAACAAGGATGCGAAAGA
CCCAGAAACTCTTGCAAACTTAGTTGTGTGCAGTATTCATGTGGGAACATCATCATCACGTTACCTAAGCCAGCTGAAACTGTCGC
ATCCAGACATGTACTGTGAGCGAGCAGCATCTGCTGAGATA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_174351 coatomer subunit epsilon-1 [Arabidopsis thaliana] | 1318 | 3e-143 |
| AAM65018 coatomer-like protein, epsilon subunit [Arabidopsis thaliana] | 1318 | 3e-143 |
| XP_002893638 coatomer protein epsilon subunit family protein [Arabidopsis lyrata subsp. lyrata] | 1308 | 4e-142 |
| NP_181030 coatomer subunit epsilon-2 [Arabidopsis thaliana] | 1217 | 2e-131 |
| XP_002317073 predicted protein [Populus trichocarpa] | 1212 | 6e-131 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SA78 Coatomer subunit epsilon-1 | 1318 | 1e-144 |
| O64748 Coatomer subunit epsilon-2 | 1217 | 7e-133 |
| Q9MAX6 Coatomer subunit epsilon-1 | 1094 | 1e-118 |
| P0C541 Coatomer subunit epsilon-2 | 932 | 8e-100 |
| A2XY73 Coatomer subunit epsilon-2 | 928 | 2e-099 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9I0V9 Predicted protein | 1212 | 4e-131 |
| B9SV80 Coatomer epsilon subunit, putative | 1164 | 2e-125 |
| Q9MAX8 Epsilon1-COP | 1104 | 1e-118 |
| B7E599 cDNA clone:001-030-H03, full insert sequence | 1090 | 6e-117 |
| B8AU46 Putative uncharacterized protein | 1090 | 6e-117 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G30630.1 coatomer protein epsilon subunit family protein / COPE family protein | 1318 | 1e-145 |
| AT2G34840.1 coatomer protein epsilon subunit family protein / COPE family protein | 1217 | 6e-134 |
| AT2G34840.2 coatomer protein epsilon subunit family protein / COPE family protein | 888 | 9e-096 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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