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Information for unigene UN14438
| FASTA Sequence |
| Unigene ID: UN14438 | Length: 1005 |
SSR | SNP | CGACACAAGACAATACATATATTTTCATTAACTTCTTACTTTGTAGAAACACTGACTATAAAGGATATGACGATAATAGCTAAAAA
CACAACTCCTGTGTTCATTTGTGCATCTGGCAGGGACATACATATCTCATTGTAATTTAGATTTTGAGTTATAAGCAGAGAGAAGA
AATAAAAAGCAGAATGGTTGAATCTTTATTAAGTGGCTAAACATAGTCGTTTGAAAAACAAAAGTCTTCAAATCACTAAGCTCACA
GCAATGGATGATCAGATGGAGAAAACTTCATGAGAAGTTGAGAGTTACAGAGGAAGCTCACCACTGTCAACAATCACAACTTTACT
CTTAGGAGTTCCACTCTGAGTACCCTCAGCTTCGATTTTGTACACCACGTCCATTCCTGTAACTACCTTCCCGAACACTACGTGCC
TCCCGTCCAACCAGCTTGTTGTAACTGTTGTGATGAAAAACTGTGATCCGTTGGTGTCTTCACCGGCGTTTGCCATTGATAGATAC
CCTGGACCAGTATGCTTGAGTTTGAAGTTCTCATCAGCAAACTTCTCACCATAAATAGATTCACCACCCATACCATTACCATCAGT
AAAGTCGCCTCCCTGGAGCATAAAGCTTGGTATGATCCTATGGAAGGAACTCCCCTTGTAATGCAGAGCCTTCCCTTTCTTACCTA
CTCCTTTCTCCCCTGTGCACAAAGCTCGGAAATTCTCTGCAGTTTTAGGGACTGTCTTGCCAAATAGACCCATGACAATACGACCG
GCTTCTTTGCCATTAATTTCGACATCGAAATAAACCTTGTGTGTGATCTTTTCCTTCTTTTTGGCCTGAATAGAGATTAGGGTTCC
CAGAAGAAGAAGACTCCACAGAAGCAGTTTCACTGACCTCGCCATCTCTGATCTCTCTCTCTCGCACCCTCAAACTGTTTCTCTCT
CTTTTTCTGTCAGCCTTTTTTGCATTTTTATTTCCACTTGTGCCATAACAAAGAACCCC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_200679 Peptidyl-prolyl cis-trans isomerase CYP20-1 [Arabidopsis thaliana] | 946 | 5e-100 |
| XP_002864586 hypothetical protein ARALYDRAFT_495994 [Arabidopsis lyrata subsp. lyrata] | 946 | 5e-100 |
| ACU13170 unknown [Glycine max] | 910 | 7e-096 |
| AAB71401 cyclophilin [Arabidopsis thaliana] | 875 | 8e-092 |
| NP_180557 Peptidyl-prolyl cis-trans isomerase CYP19-4 [Arabidopsis thaliana] | 874 | 1e-091 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SP02 Peptidyl-prolyl cis-trans isomerase CYP20-1 | 946 | 2e-101 |
| Q8LDP4 Peptidyl-prolyl cis-trans isomerase CYP19-4 | 874 | 5e-093 |
| Q9TW32 Peptidyl-prolyl cis-trans isomerase B | 676 | 4e-070 |
| P52015 Peptidyl-prolyl cis-trans isomerase 7 | 662 | 2e-068 |
| P52010 Peptidyl-prolyl cis-trans isomerase 2 | 647 | 1e-066 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C6SV97 Peptidyl-prolyl cis-trans isomerase | 910 | 5e-096 |
| A5C2G6 Peptidyl-prolyl cis-trans isomerase | 868 | 4e-091 |
| A9PAQ9 Peptidyl-prolyl cis-trans isomerase | 868 | 4e-091 |
| B9GIH7 Peptidyl-prolyl cis-trans isomerase | 857 | 7e-090 |
| B9SI28 Peptidyl-prolyl cis-trans isomerase | 852 | 3e-089 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G58710.1 ROC7; peptidyl-prolyl cis-trans isomerase | 947 | 2e-102 |
| AT2G29960.1 CYP5 (CYCLOPHILIN 5); peptidyl-prolyl cis-trans isomerase | 875 | 3e-094 |
| AT3G55920.1 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative | 724 | 1e-076 |
| AT2G16600.1 ROC3; peptidyl-prolyl cis-trans isomerase | 627 | 2e-065 |
| AT2G21130.1 peptidyl-prolyl cis-trans isomerase / cyclophilin (CYP2) / rotamase | 627 | 2e-065 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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