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Information for unigene UN14438

FASTA Sequence
Unigene ID: UN14438Length: 1005 SSRSNP
CGACACAAGACAATACATATATTTTCATTAACTTCTTACTTTGTAGAAACACTGACTATAAAGGATATGACGATAATAGCTAAAAA
CACAACTCCTGTGTTCATTTGTGCATCTGGCAGGGACATACATATCTCATTGTAATTTAGATTTTGAGTTATAAGCAGAGAGAAGA
AATAAAAAGCAGAATGGTTGAATCTTTATTAAGTGGCTAAACATAGTCGTTTGAAAAACAAAAGTCTTCAAATCACTAAGCTCACA
GCAATGGATGATCAGATGGAGAAAACTTCATGAGAAGTTGAGAGTTACAGAGGAAGCTCACCACTGTCAACAATCACAACTTTACT
CTTAGGAGTTCCACTCTGAGTACCCTCAGCTTCGATTTTGTACACCACGTCCATTCCTGTAACTACCTTCCCGAACACTACGTGCC
TCCCGTCCAACCAGCTTGTTGTAACTGTTGTGATGAAAAACTGTGATCCGTTGGTGTCTTCACCGGCGTTTGCCATTGATAGATAC
CCTGGACCAGTATGCTTGAGTTTGAAGTTCTCATCAGCAAACTTCTCACCATAAATAGATTCACCACCCATACCATTACCATCAGT
AAAGTCGCCTCCCTGGAGCATAAAGCTTGGTATGATCCTATGGAAGGAACTCCCCTTGTAATGCAGAGCCTTCCCTTTCTTACCTA
CTCCTTTCTCCCCTGTGCACAAAGCTCGGAAATTCTCTGCAGTTTTAGGGACTGTCTTGCCAAATAGACCCATGACAATACGACCG
GCTTCTTTGCCATTAATTTCGACATCGAAATAAACCTTGTGTGTGATCTTTTCCTTCTTTTTGGCCTGAATAGAGATTAGGGTTCC
CAGAAGAAGAAGACTCCACAGAAGCAGTTTCACTGACCTCGCCATCTCTGATCTCTCTCTCTCGCACCCTCAAACTGTTTCTCTCT
CTTTTTCTGTCAGCCTTTTTTGCATTTTTATTTCCACTTGTGCCATAACAAAGAACCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_200679 Peptidyl-prolyl cis-trans isomerase CYP20-1 [Arabidopsis thaliana]9465e-100
XP_002864586 hypothetical protein ARALYDRAFT_495994 [Arabidopsis lyrata subsp. lyrata]9465e-100
ACU13170 unknown [Glycine max]9107e-096
AAB71401 cyclophilin [Arabidopsis thaliana]8758e-092
NP_180557 Peptidyl-prolyl cis-trans isomerase CYP19-4 [Arabidopsis thaliana]8741e-091

Swiss-Prot top hits (Blast detail)Scoree value
Q9SP02 Peptidyl-prolyl cis-trans isomerase CYP20-19462e-101
Q8LDP4 Peptidyl-prolyl cis-trans isomerase CYP19-48745e-093
Q9TW32 Peptidyl-prolyl cis-trans isomerase B6764e-070
P52015 Peptidyl-prolyl cis-trans isomerase 76622e-068
P52010 Peptidyl-prolyl cis-trans isomerase 26471e-066

TrEMBL top hits (Blast detail)Scoree value
C6SV97 Peptidyl-prolyl cis-trans isomerase9105e-096
A5C2G6 Peptidyl-prolyl cis-trans isomerase8684e-091
A9PAQ9 Peptidyl-prolyl cis-trans isomerase8684e-091
B9GIH7 Peptidyl-prolyl cis-trans isomerase8577e-090
B9SI28 Peptidyl-prolyl cis-trans isomerase8523e-089

Arabidopsis top hits (Blast detail)Scoree value
AT5G58710.1 ROC7; peptidyl-prolyl cis-trans isomerase9472e-102
AT2G29960.1 CYP5 (CYCLOPHILIN 5); peptidyl-prolyl cis-trans isomerase8753e-094
AT3G55920.1 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative7241e-076
AT2G16600.1 ROC3; peptidyl-prolyl cis-trans isomerase6272e-065
AT2G21130.1 peptidyl-prolyl cis-trans isomerase / cyclophilin (CYP2) / rotamase6272e-065

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
83  12%
 
115  20%
 
1210  40%
 
94  16%
 
103  12%

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