RadishBase

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Information for unigene UN14454

FASTA Sequence

Unigene ID: UN14454	Length: 826	SSR
CGTGAACGATGAAACCTCCACATCTCTCCTCTGGCCATGAATTCATCGCCATGAAAGCTTGAGCTCTCTCTCCGTGACTCTCTCTC TCTCTCTCTGCGTCTCTCTGTCCGCGTCTCTCTCTTCGCATCTCTCTCGCCATGAAATCGCCATGAAAGCTTGAGATCTCTCTCTC CGCCTCTCTCTCTCCGTGTCTCTCTCTCTCCGCGTCTCTCTCTCTCCGCTCTCTCTCTCTCTCAGGGGGTGTGCCTTGCAGTGTGC CATTCTCAGACCCACCTTCAAAGTCTGTGAGTTCCAGGTTCATGAGAGTTTCCCTTTCTCCATTTCGCTGGCGTGGAAAGGAGCAG CTGTTGATGCTCAAAATGAAGGAGCTGAGAATCAGCAGAGCACCATTGTTTTCCCCAAAGGAAACTCAATTCCTAGTGCCAAGGCG CTCTAACGTTTTACCGCTCTGGAACATTCTCTGTCGATGTGCAGTACATTGATGTGACTGACTTGCAAGCACCTCCAAAAATCAGC ACATACACGGTTTGATCTTTGCCCAATGTCGTGTGTATCCTTAAGACTGTAGCGTGCCTTTTTCAGTTGATGGATCTTATTATCAG TCACGAGTTTGTTTGTTGAGTCTGAGATCATTTTGTGTTGAGTCAAGTCTCATATGTGTGGGTTTTAGTTTTGAGAAATGGTGAAT GATGATGTATGATTCAGTAATTGTTAAACCTATGTTGTGTTTGTGTTGTTGTTGCAGGAAATGTAACGATGTATAAAGCTATATTT TGTGGTTTATGTGTAATTGTGTTTATGGCATTTTAGTATGAGATATATAGTG

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
AAG52244 putative heat-shock protein; 41956-44878 [Arabidopsis thaliana]	303	1e-025
AAL38353 putative heat-shock protein [Arabidopsis thaliana]	303	1e-025
NP_850984 Heat shock protein 70 [Arabidopsis thaliana]	303	1e-025
NP_178110 Heat shock protein 70 [Arabidopsis thaliana]	303	1e-025
NP_178111 heat shock protein 91 [Arabidopsis thaliana]	301	2e-025

Swiss-Prot top hits (Blast detail)	Score	e value
Q2TFN9 Heat shock 70 kDa protein 4	139	6e-008
O88600 Heat shock 70 kDa protein 4	139	6e-008
Q61316 Heat shock 70 kDa protein 4	137	1e-007
O59838 Heat shock protein homolog pss1	137	1e-007
Q0IIM3 Heat shock protein 105 kDa	136	1e-007

TrEMBL top hits (Blast detail)	Score	e value
Q3EC99 Putative uncharacterized protein At1g79920.1	303	9e-026
Q8VZ83 Putative heat-shock protein	303	9e-026
Q9CA95 Putative heat-shock protein; 41956-44878	303	9e-026
Q2V4B7 Putative heat shock protein	301	2e-025
Q96269 Heat-shock protein	301	2e-025

Arabidopsis top hits (Blast detail)	Score	e value
AT1G79920.1 ATP binding	303	5e-028
AT1G79920.2 ATP binding	303	5e-028
AT1G79930.1 HSP91; ATP binding	301	9e-028
AT1G79930.2 HSP91; ATP binding	301	9e-028
AT1G11660.1 heat shock protein, putative	131	5e-008

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


10	6			60%


11	2			20%


9	2			20%

Unigene Members	Member information