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Information for unigene UN14518

FASTA Sequence
Unigene ID: UN14518Length: 846  SNP
TTTTTTCTTACATAACAAAGATAGAGAGAGAGAAAGCCTTGGTGGGTTCAATAGATTCTTTCTCTTGTCTTGTCTCTTCAAAGCCA
CGCCCCGTTGGTAAAGATGGAGGAACAGTTCATACTTAGGGTTCCACAGTCTGTTTCAGAGCGAATCGATCGCCTTTTGAGCGACG
AGGCTTCTTCTACTTCCGACGAGATCCCTTTAGATTTATGCTTTTCAGAGGATGGGAGAAGCGGGACGTTTGTAATTGGAAACGAA
GAGTTCCCGGCTTCTCTGCTGGACCTTCCTGCTGTTGTTGAGTCTTTCAAAACTTATGATGACTCTGCACTTGTCAAAACTGCTGA
CATTGGCCAGATGATCATGGTTAGGGAGCAGGGAGATCCTGCGCCTAATACAGTTGAGTACAGACATGGTCTAACTCCTCCTATGA
AGGATGCTCGTAAGAGAAGATTTCGTCGAGAGCCTGATCTTAATCCGGAGCTTGTACAGCGCGTTGAGAGGGACTTGCTGAACATC
TTGAGTGGCAGAACTGTCGAAAACGGAAATGAGCAGCAAGGGAGACAGTTGCGGAGGAGAATACAAATAAGAAAGTCTCTTCTACT
TCTTCACCTGCTGCTACACCTGTTGAAAAGCCTGAAGAAGCTCCTGAGGCAGGGACTAATAATAACAATCATAATACTCCAGCAGA
AGTTGAGCAGGAGAGAAGTGAATCAGAAGATTCTGATGATTCTATGTGAAAGGTTGGTTATGTATGTATCACGTTTGAAGAAACGA
ATGCAGCTATGTTTACCACTTTTATCATTTATTGGTTCGTGGTCAGGAAGAGTAGAGCGTTACGATCTGGTA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002894499 hypothetical protein ARALYDRAFT_474587 [Arabidopsis lyrata subsp. lyrata]6964e-071
NP_175926 TBP-associated factor 7 [Arabidopsis thaliana]6784e-069
NP_001031194 TBP-associated factor 7 [Arabidopsis thaliana]6686e-068
XP_002285704 PREDICTED: similar to TAF7 (TBP-ASSOCIATED FACTOR 7); general RNA polymerase II transcription factor [Vitis vinifera]6005e-060
CBI16511 unnamed protein product [Vitis vinifera]5933e-059

Swiss-Prot top hits (Blast detail)Scoree value
Q9D3R9 Transcription initiation factor TFIID subunit 7-like1683e-011
Q9R1C0 Transcription initiation factor TFIID subunit 71541e-009
Q6R1L1 Transcription initiation factor TFIID subunit 71503e-009
Q2HJG8 Transcription initiation factor TFIID subunit 71486e-009
Q15545 Transcription initiation factor TFIID subunit 71486e-009

TrEMBL top hits (Blast detail)Scoree value
Q9C8A0 AT1G55300 protein6783e-069
Q2V4G7 AT1G55300 protein6684e-068
B9GLF9 Predicted protein5923e-059
B9GY83 Predicted protein5852e-058
C6T015 Putative uncharacterized protein5842e-058

Arabidopsis top hits (Blast detail)Scoree value
AT1G55300.1 TAF7 (TBP-ASSOCIATED FACTOR 7); general RNA polymerase II transcription factor6835e-072
AT1G55300.2 TAF7 (TBP-ASSOCIATED FACTOR 7); general RNA polymerase II transcription factor6737e-071

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
105  36%
 
113  21%
 
84  29%
 
62  14%

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