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Information for unigene UN14526
| FASTA Sequence |
| Unigene ID: UN14526 | Length: 599 |
| SNP | GGAAGAACCCAACAACTATAATAGTACAAAAAAAAAGAAAAGAAAAATGGAGGCAGGGAAGACACCACCGGCGACGACAACGACAC
CGACGGAGAAGAAACCAGAGCAAGAAGTGAAAAACGACGACTTGCCGACAAACAGTCCTTACGTGGACGACTCTGGTAGCTTGGAG
GATTATAAAATGAAAGCTTATGGAGCCCAAGGCCACCAAGAGGTTAAGGCTGGCCTCGGTGGTGGATCTACCGATGCTCCTACTCC
TTCTGGTGGAGGAACCACCGCTACTGCTGAGAAAGCTCCTTGAAAGCTTAAAAAACTTTAATAATAATGGGTTAAAATACCAAGAT
TTGTAGCCACTTTATTCGAATCACTGATCCAAGTTCCGTTTGTATGGGTTATCTTTTTTTTTCTCAAGCTTCTAAACTAATAAGGT
TCCGAACCTGTTAGCCAACTCGGTGGGTTATGTACTAAAATGTAATTGCATGTATTACTGAGTGTGAAAATAATTTCCTGAGTTTC
ATAAGGTAAATTAAATATTCGTATGTTACTGACGAAACGTTTGTGCAACGGTTAGGTATCTAATACGATCTTACTTCTGGTGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_565548 Late embryogenesis abundant protein, group 6 [Arabidopsis thaliana] | 268 | 7e-022 |
| AAK44026 unknown protein [Arabidopsis thaliana] | 263 | 3e-021 |
| XP_002878660 hypothetical protein ARALYDRAFT_481185 [Arabidopsis lyrata subsp. lyrata] | 237 | 3e-018 |
| XP_002878659 predicted protein [Arabidopsis lyrata subsp. lyrata] | 208 | 7e-015 |
| NP_179892 Late embryogenesis abundant protein, group 6 [Arabidopsis thaliana] | 205 | 1e-014 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q8S8R1 Expressed protein | 268 | 5e-022 |
| Q94K79 Putative uncharacterized protein At2g23120 | 263 | 2e-021 |
| O64820 At2g23110 | 205 | 1e-014 |
| O23658 Putative uncharacterized protein At2g33690 | 151 | 2e-008 |
| Q6NLU9 At2g33690 | 151 | 2e-008 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G23120.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein 18 (InterPro:IPR018930); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23110.1); Has 25 Blast hits to 25 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 279 | 2e-025 |
| AT2G23110.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein 18 (InterPro:IPR018930); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23120.1); Has 25 Blast hits to 25 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 205 | 7e-017 |
| AT2G33690.1 late embryogenesis abundant protein, putative / LEA protein, putative | 151 | 1e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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