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Information for unigene UN14543
| FASTA Sequence |
| Unigene ID: UN14543 | Length: 405 |
| SNP | TAAAATTCTGCAATTTGTAACAAAAGTTTTACTCTCTCGAGCATAAAAAAAAAGTGTCTTGAAACAACAAAAGCTGTAACTACTAC
CCTTCTTCATCGTCCCTGGTTATCTTTTAAGTAGCACCGACAATGATGTTGTTGATGGGAATAAAGATGAGCTTCACAAAGAAACC
GACAAATCCCATCACTACAAAACCAATAGCTGTACGGACCGCCACTTTCGTGAATTCTTTGCGATCTGGTTTGTGACAACGCTTAA
CGAGACGAATGCTGTCCTTGGCAAAGTCTCTTAGAGGATCTACGACTGAATCGATGGCATCCATGGCTATTTCTTTTCTTTTTTTC
TTTTAATTTGTGTTTTTCTTTTTCTCGATTGGTACGAAGAGAAACAAGTTGAGAGTTATCC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_194222 protein transport protein sec61 subunit gamma-1 [Arabidopsis thaliana] | 349 | 1e-031 |
| NP_001148682 protein transport protein SEC61 gamma subunit [Zea mays] | 336 | 4e-030 |
| NP_001147308 protein transport protein SEC61 gamma subunit [Zea mays] | 335 | 5e-030 |
| XP_002318732 predicted protein [Populus trichocarpa] | 332 | 1e-029 |
| XP_002451650 hypothetical protein SORBIDRAFT_04g005280 [Sorghum bicolor] | 332 | 1e-029 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SW34 Protein transport protein Sec61 subunit gamma-1 | 349 | 4e-033 |
| P38385 Protein transport protein Sec61 subunit gamma | 331 | 5e-031 |
| Q9SMP2 Protein transport protein Sec61 subunit gamma-3 | 321 | 7e-030 |
| Q7Z1B8 Protein transport protein Sec61 subunit gamma | 263 | 4e-023 |
| Q8I7D9 Protein transport protein Sec61 subunit gamma | 259 | 1e-022 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B6SPI4 Protein transport protein SEC61 gamma subunit | 336 | 3e-030 |
| C5Z769 Putative uncharacterized protein Sb10g026000 | 336 | 3e-030 |
| B6SPB6 Protein transport protein SEC61 gamma subunit | 335 | 3e-030 |
| A9P9P6 Predicted protein | 332 | 8e-030 |
| B6TB44 Protein transport protein SEC61 gamma subunit | 332 | 8e-030 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G24920.1 protein transport protein SEC61 gamma subunit, putative | 350 | 5e-034 |
| AT5G50460.1 protein transport protein SEC61 gamma subunit, putative | 350 | 5e-034 |
| AT3G48570.1 protein transport protein SEC61 gamma subunit, putative | 322 | 9e-031 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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