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Information for unigene UN14554

FASTA Sequence
Unigene ID: UN14554Length: 1545 SSR 
GGAGAGCTCACTCTCTCTCTCTCTCTCTCTCTCAAATCTCCAAACTCACCACACTCTCTCTCCACAGTTTCAACAATGGCGAAGAA
GATGAGAGCAATATACATTCTCCCCATCCTCCTCCTCGCTTTCCAGACACACGCGCACAACGTCACGCGCCTCTTAGCAAGCCACC
CTTCTTTCTCCTCCTTCAACCACTTCCTCACCCAAACTCACCTCGCCGGCGAAATCAACCGGAGAACAACCATAACCGTCCTCGCC
GTCGACAACGCCGCCATGTCCGCCTTGACCTCGAAAGGCTACACCATCTCCACCATCAAGAACATCCTCTCCCTCCACGTCCTCCT
CGACTACTTCGGCGCCAAGAAAATCCACCAGATCCGCGACGGCTCCGCTCTCGCCGCCACCCTCTTCCAGGCCACCGGAGCTGCTC
CCGGAACCACCGGGTTCGTCAACATAACGGATCTGAGAGGCGGTAAGGTCGGGCTCGGTCCCGACGGCGGAGATCTGTCTTCCTTC
TTCGTCAAGTCCGTCGAGGAAGTTCCCTACAACATCTCCATCATCCAGATCAGCAAAGTCTTGCCGTCGGAAACCGCGTCGGCTCC
GAGTCCGGCTCCGGCTGAGATGAATCTCACCGGAATAATGTCGGCTCATGGCTGTAAAGTTTTCGCCGAGACGCTTCTCGCTAACA
CTGGTGCTTCAAAAACTTACCAGGAGAGTGTAGAAGGAGGCATGACAGTGTTCTGTCCAGGAGATGACGCCATGAAAGGATTCTTG
CCCAAATACAAGAACTTGACTGCTCCAAAGAAAGAAGCCTTCCTCGATTTCCTCGCTGTCCCAACGTATTACTCAATGGCCATGCT
CAAATCCAACAACGGTCCGATGAACACACTAGCCACGGACGGAGCCAACAAGTTCGAGCTCACTGTACAGAACGATGGAGAGAAAG
TTACCCTCAGGACAAGGATCAGCACTGTCCAGATCGTTGATACTCTGATCGACGAGCAGCCATTGGCTATCTATGCGACTGATAAG
GTTTTACTGCCTAAAGAGCTGTTTAAGGCCTCGGCTGTTGAAGCACCGGCTCCTGCTCCGGCGCCGGAGGGCGATGCTGCGGATTC
TCCGAAACCTGCTAAAGGGAAAGGGAAGGGGAAGAAGAAGAAGGCTGCACCGTCACCTGATGATGATTCTTTCGGTGATTCGCCTG
CTGAAGGGCCCGATGGAGATGCGGATGACGCGACTGCTGATGAAGCCAGTGCGGTTAGGATCCTCGGTGGAGCAACGGCTGGTTTG
GTGGTGAGCTTGTTCTGCTTGTTTGCTTCTTCCTCGCTTCTGTAGTTCACTTCTTGGTTTTGTTCGTTGTTCTAGAATCTTTATTT
ATGGATTTGAGGGAAAGTAATTGATGTTTATTTTAGTGTGTCCCTGTTATTTAAAGCTTGGGTGTCAAATTAATTAGTCGGTGGAC
CTTTTTTTGTTTGGGGTGTTTTGGTTCACGTGTGTGTTTGGTTGATGATGTAATGAATGGTGTACTGTTTGGCCGTTGGGATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_200384 fasciclin-like arabinogalactan protein 1 [Arabidopsis thaliana]19002e-210
XP_002866110 hypothetical protein ARALYDRAFT_495659 [Arabidopsis lyrata subsp. lyrata]18975e-210
ABV27482 fasciclin-like arabinogalactan protein 11 [Gossypium hirsutum]13421e-145
ABV27481 fasciclin-like arabinogalactan protein 10 [Gossypium hirsutum]13276e-144
XP_002522745 conserved hypothetical protein [Ricinus communis]12497e-135

Swiss-Prot top hits (Blast detail)Scoree value
Q9FM65 Fasciclin-like arabinogalactan protein 119009e-212
Q9SU13 Fasciclin-like arabinogalactan protein 29671e-103
O22126 Fasciclin-like arabinogalactan protein 88084e-085
Q9LZX4 Fasciclin-like arabinogalactan protein 107734e-081
Q9LTW9 Fasciclin-like arabinogalactan protein 143041e-026

TrEMBL top hits (Blast detail)Scoree value
A9XTL6 Fasciclin-like arabinogalactan protein 1113428e-146
A9XTL5 Fasciclin-like arabinogalactan protein 1013274e-144
B9S9S6 Putative uncharacterized protein12495e-135
B9GFM2 Fasciclin-like arabinogalactan protein (Fragment)12343e-133
B9I1A6 Fasciclin-like arabinogalactan protein (Fragment)11975e-129

Arabidopsis top hits (Blast detail)Scoree value
AT5G55730.1 FLA1 (FASCICLIN-LIKE ARAB INOGALACTAN 1)19016e-213
AT4G12730.1 FLA2 (FASCICLIN-LIKE ARABINOGALACTAN 2)9671e-104
AT2G45470.1 FLA8 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8)8083e-086
AT3G60900.1 FLA107743e-082
AT3G12660.1 FLA14 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 14 PRECURSOR)3049e-028

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  14%
 
181  14%
 
81  14%
 
114  57%

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