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Information for unigene UN14559
| FASTA Sequence |
| Unigene ID: UN14559 | Length: 1005 |
SSR | | GAAGAAAACACACCACTTTAGCATTAATATTTGCACGAAGAACTTTTACAACCGAGCTTAGTGTTTCCACGTACATTAATACAAAC
AGTTTAGAAGCTTTTGGAAATAAAAGTGACTGAAAAAAACAAATACAAAAGATGAAGAAATAACGTTGTTCAGGTGTCCTACATGG
AAACAAATGAGATAATATATATGGTTAAAAGTGTTGACAAAACGCATTAAGAAGAGCAGCAGCTTGATTGCTGGTTTACAGGTTGT
CCTCGGATCTGGACTGTTGAAGGCTTAGATCACCAGCAGGTTGGCTCGCCATTCTTGTCTTGATTGCAGCAGTCATGGCCATGAAA
GCTTCTTCAACATTTGTAGCGTTCTTGGCACTTGTTTCCAAGAAAGGGATTCCAAGTTCATCGGCGAAAGCCTTGGCTGTCTCAGT
GGATACAACTTTCTGTGAAGTGAGATCACACTTGTTCCCAACCAGTAGCTTGTTCACATTCTCACTGGCGTAGCGGTCGATTTCAT
TTAGCCATTGCTTGACATTGTTGAAGCTTTCTTGGTCTGTTACATCGTAAGTCACAATGATTCCATGAGCTCCTCTGTAGTAACTG
CTAGTGATGGTTCTGAAACGTTCTTGACCTGCTGTGTCCCAAATCTGGAGTTTGATTGTCTTTCCATCTTGTTCGACTGTGCGGAT
TTTAAAGTCAACACCAATGGTACTGATGTAGCTATCCAGGTAGGAATCATCAGCAAACCTAAGAAGCAAGCAGGACTTTCCAACAC
CGGAATCACCAATAAGCAAAAGCTTGAAGAGATAGTCATATTCAGGATTCATGGCTGATATCGTAGCTGGATCGATCTACAGGTGA
GAACGAAGCGTAGATTTCGCCGATACGGCAGGTGAGGAGCTCCCTCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACGTA
AACGCTCGCTTTGTGTCGACCGAGGGATGAGGACGTGGTTTAGAAATAAGAAAGGTCCC
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| GenBank top hits (Blast detail) | Score | e value |
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| ABD65068 GTP-binding protein, putative [Brassica oleracea] | 915 | 2e-096 |
| NP_193486 RAB GTPase homolog 1C [Arabidopsis thaliana] | 908 | 1e-095 |
| AAL31108 AT4g17530/dl4800c [Arabidopsis thaliana] | 908 | 1e-095 |
| ABD64935 GTP-binding protein, putative [Brassica oleracea] | 896 | 3e-094 |
| NP_568678 RAB GTPase-1A [Arabidopsis thaliana] | 896 | 3e-094 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q05737 GTP-binding protein YPTM2 | 855 | 8e-091 |
| P40392 Ras-related protein RIC1 | 829 | 8e-088 |
| P28188 Ras-related protein RABD2A | 825 | 2e-087 |
| Q39571 GTP-binding protein YPTC1 | 817 | 2e-086 |
| P31584 GTP-binding protein yptV1 | 807 | 3e-085 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2A9H3 GTP-binding protein, putative | 915 | 1e-096 |
| Q8W4S8 AT4g17530/dl4800c | 908 | 9e-096 |
| Q9SEH3 AT4g17530/dl4800c | 908 | 9e-096 |
| Q2A9V7 GTP-binding protein, putative | 896 | 2e-094 |
| Q9FPJ4 AT5g47200 | 896 | 2e-094 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G17530.1 ATRAB1C; GTP binding | 908 | 5e-098 |
| AT5G47200.1 ATRAB1A; GTP binding | 896 | 1e-096 |
| AT1G02130.1 ARA-5 (ARABIDOPSIS RAS 5); GTP binding | 825 | 2e-088 |
| AT3G11730.1 ATFP8; GTP binding / GTP-dependent protein binding / myosin XI tail binding | 733 | 1e-077 |
| AT3G09900.1 ATRABE1E (ARABIDOPSIS RAB GTPASE HOMOLOG E1E); GTP binding | 594 | 1e-061 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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