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Information for unigene UN14578
| FASTA Sequence |
| Unigene ID: UN14578 | Length: 1120 |
| SNP | GCAGGAACATAATCTCTATAAGAATTTGAGAAAAAAAAATGTAAATCCACATTTTGAAGACATAACAAAGTGTTTAATCACTTCAG
TAGTCGCAGTATTATTCCATCCGTATAGCAGCATTTTATTTCTTGTCGCCAGTGGCTACCCAAGAGCCAACAGTTGAAAAATAGAA
GAAAATAATAAATTCAATTAGAGTAGTTTAAAGCTTTTGCTCAGAGGCAGAGCTTTTAGTTGTGTTTGCCGTCGTTAAACTGTGCG
TTTTTGGAAGACTTGAAAGTTTGAAGAAACTCTTTAGCCTTCTGCAACTCCTGCTTCTCCCTCGACTTGTCCCACTTGTGTTCACT
CGCTAGAATCTCCACCACACGCTGCAACGCCCTCGCCGCTGCGTCTGTGTCCAAGAACGCTATTCTACATCTCCTTGCTATGAAAT
CAACCGCTGATTCGCAGTACTCGTGCCTTGCACAGTAAGCAACCTCTGCTTCCAGAAACGGATGTCCATGTGCCAACCGTTTCCCC
AAACCCTCCTCCTGAGCAATGGTGGCGACTCGGTCAGCCATTGAACCATAGGCATGAGACAAATGCTTAGCAGCAGCTGTGTCCAT
TGCTCCAGGAACCACTTTACCACCATATGTTTTCTTCATGCGCACGTACTGCTGCGCAAGAGCTGTGAAAGAAGATGGTTCCCATC
CATAAGAGCCTAGAATCTGTAGCTTCTGTGTTACACATTCATTGGTTGGACTCAGCTTTCCCGATTTGATTGCTGCATCAACCGCA
TCTTCCGCCATACTTCGATAAGTAGTCCATTTTCCACCCGTGATTGTGACCAGACCAGGGTTCTCCTCGAAGACAACGTGGTCTCT
GGAGATACTCTCTGTGCTCTTTGCTGTAGGATCCATGGCCAATGGACGGATACCACTCCAAGCAGAAAGCACATCAGTACGTCGAA
CCTTAATGTTAAGATAGTCGCTGATTGCATCCAGTATAAACTGAATCTCATCCTCATGAGGTTCAGGAAGCGGAGTGATTGATGTA
TTAGAGTCTGTAGTGCCTGCTACTGTTCTTCCCAACCACGGTAACATGAACACAACACGACCATCCTTAGTTTTCGGGACTATCAA
CC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002862424 hypothetical protein ARALYDRAFT_497460 [Arabidopsis lyrata subsp. lyrata] | 1515 | 6e-166 |
| XP_002882664 hypothetical protein ARALYDRAFT_478367 [Arabidopsis lyrata subsp. lyrata] | 1515 | 6e-166 |
| NP_187648 glycerol-3-phosphate dehydrogenase SDP6 [Arabidopsis thaliana] | 1507 | 5e-165 |
| XP_002529602 glycerol-3-phosphate dehydrogenase, putative [Ricinus communis] | 1341 | 9e-146 |
| NP_001130846 hypothetical protein LOC100191950 [Zea mays] | 1333 | 8e-145 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SS48 Glycerol-3-phosphate dehydrogenase SDP6, mitochondrial | 1507 | 2e-166 |
| P90795 Probable glycerol-3-phosphate dehydrogenase, mitochondrial | 569 | 1e-057 |
| Q4R755 Glycerol-3-phosphate dehydrogenase, mitochondrial | 555 | 6e-056 |
| A6QLU1 Glycerol-3-phosphate dehydrogenase, mitochondrial | 549 | 3e-055 |
| Q54QC1 Probable glycerol-3-phosphate dehydrogenase, mitochondrial | 549 | 3e-055 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SUD3 Glycerol-3-phosphate dehydrogenase, putative | 1341 | 6e-146 |
| B4FAS1 Putative uncharacterized protein | 1333 | 5e-145 |
| A5C9F4 Putative uncharacterized protein | 1327 | 3e-144 |
| B9HUJ0 Predicted protein | 1322 | 1e-143 |
| C5YD63 Putative uncharacterized protein Sb06g003053 (Fragment) | 1321 | 1e-143 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G10370.1 SDP6 (SUGAR-DEPENDENT 6); glycerol-3-phosphate dehydrogenase | 1508 | 2e-167 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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