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Information for unigene UN14592

FASTA Sequence
Unigene ID: UN14592Length: 1063 SSR 
CGTTTCATACGTAACTTCTTTACGACCTTCTCTCTCTCTCTCTTTCCTTTTCTCTCTTTCGTTTCTCCGGCGAGATGCTGAAGGAA
AGACAGGTTTTACCGGACTCAAGCAACAAGAACAGGGTATCTCCCTACCCGCTACGCTCTTGTCGGAGCAAGAAACAAAAGGAAGA
AGCCGAGTCACCTCTCGAGCCAGAGAGCGTGAGTGAATGGGAGGACGTGAGGTGTGTGATCTGCATGGAGCCGCCTCACAATGCTG
TCCTGTTGCAGTGCTCTTCCTTCTCCAAAGGCTGCCGCGCTTACATGTGCGACACGAGCGCGCGTCACTCCAACTGCTTCAAGCAG
TACCGCAGAAACAAGAAGAACACGAGCCGCTCCAGCAGCAGTGGCAGCAAGACTCTGAGCTGTCCGTACTGCAGAGGAGAGGTTCA
CGGGACGGTGAAGTCGACTAGCGCGAGGAGGTTCATGAACGCGAAGCCGAGGGGATGTTCTATGGACGATTGCGAGTTCTCTGGGA
CTTACTCTCAGCTGAAGACTCACTTGAAAGCTGAGCATCCGGGTTTCACAGCTCCGAAGCTGGAGGACACTTGGGAGCACCGCAGC
ATGTGGGAGGAAGTGGAGAGAGCGGAGTTCATTGAGATGATCAACGCTCGTCAGAGGTGGGAAGCTGAGCAGAGATTGTTGGCAGG
CCATCTCTACCAGCTTCCGCACCACCACCACCACCATCACCATCACATGATTGATCTCAACCTTGATGCTTTCATGCACGATGTTT
TCATTGGTGTGAGGGGACAACAAGCGAGTGCCGCTGGTTACTCGCCCGCTCAGATGTCCCAACTTGGGTTCCATGGAGGAGCCATG
TATCCAAGATGGACTCCGTGAAGATTCTGCCTAGTGCCGATTCAAAGTTTTGATGTCTCTTGATTCTTTTATCCAAAATGTATTCT
AAAGTGTTTAGGTTTTATAGTGACATCAGCTCTTGTTCTAGGCATAAGTTTTTACTTCTTGTTTGTATTTATGCTTGTGTTAGTCA
AGTATTCGATAAAATTTATCTAAATAAAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002890104 F9L1.39 [Arabidopsis lyrata subsp. lyrata]9108e-096
NP_563977 uncharacterized protein [Arabidopsis thaliana]9044e-095
AAD39672 F9L1.39 [Arabidopsis thaliana]8911e-093
XP_002889304 predicted protein [Arabidopsis lyrata subsp. lyrata]5291e-051
NP_178139 uncharacterized protein [Arabidopsis thaliana]5201e-050

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9C5E6 Putative uncharacterized protein At1g154309043e-095
Q9XI25 F9L1.398919e-094
Q3E7F0 Uncharacterized protein At1g80220.15209e-051
B6TQY7 Putative uncharacterized protein4178e-039
B4G170 Putative uncharacterized protein4071e-037

Arabidopsis top hits (Blast detail)Scoree value
AT1G15430.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G80220.1); Has 144 Blast hits to 135 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).9103e-098
AT1G15430.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G80220.1); Has 144 Blast hits to 135 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).9103e-098
AT1G80220.1 zinc ion binding5457e-056
AT2G26050.1 zinc ion binding3549e-034
AT1G77770.1 protein binding / zinc ion binding3216e-030

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
211  11%
 
201  11%
 
112  22%
 
125  56%

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