RadishBase

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Information for unigene UN14630

FASTA Sequence

Unigene ID: UN14630	Length: 1619		SNP
GTTCACCAATAAGATATTTTATTCAACCTCCATCCACCGTCCGGAGCAGAACAAAGAGAAGAGGATCAAATGACGCCGACTATCTT TACTCCGACGACTCTTCCTCCCTCGACTATTACATGGCCATGTACCACCACACCTCAGAAGCTCACTACCATTAGAACACCTTTCA AGCTCAAGTGTAGAGCTACTTCATCATCTTCCATCACAGACTTTGATCTTTACGACCTCTTAGGTATCGACCGGGGATCCGACAAG TCTCAGATCAAAGCAGCTTATCGTAACTTGCAAAAACGTTGTCATCCAGATATCGCAGGAGTTCCAGGCCACGACATGGCCATCAT ACTTAACGAGGCTTACAAGCTTCTGTCTGATCCTATCTCACGCCAAGCCTATGATAAGGAGCAAGCGAAACTGGAAGAGCTTAGAG GCTACACAGGGAAACCTATCTACTCGGTTTGGTGTGGACCAGAGACAGAGCAACGAGCTGTGTTTGTAGATGAGGTCAAGTGCGTT GGTTGCTTGAAGTGTGCTTTGTGTGCAGAGAGAACGTTTGCTATCGAAACAGCTCACGGGAGAGCTAGGGTTGTCGCTCAGTGGGC TGATCCTGAGTCTAAAATCAAAGAAGCTATCGAAGCTTGCCCCATAGACTGCATCTCAATGGTGGAGAGATCTGATCTAGCGCCAT TGGAGTTTCTTATGTCAAAGCAGCCTCGAGGAAACGTGAGGATAGGGGTTGGGAACACGGTTGGTGAGCGTGTCTCCAACGTGTTT GTTGATGTCAAGAAGTTCCAGCAAAGATACGCTGAATCTGTGAGCAGAACCACAAGAGAGAGCTCACATGAGAGTGACTTGCAGAG AGAAGTGAGAATGAGTGCAGTGGAAGCAATCAGGTCAATCTCCAATTGGCTATACTGGAGATCATCACCCTACTCAAAACCATTGA GTCCTGATTCAAACATGAGTCTCACTTTCACCAAACGGAAGAAAGCAGCAGAACCAAACATCAGAAAGCTTCAAGATGCTGTTGCA GCAATGAAACAAGCAGAACAGAGCGGTGAAACCAAAGAAAGACTAGCTTCCATGGTTGGAGAAGATTACTGGATTCCATCAAACCT AGCTCTTCCCTCATCCGGAAACACCAGTACCAAGACTACTTCGGTGTCTCATAAAAACACTCCATCTGAAGAGAAGGCTACTAGTA GTAGTAGACGTGAATATAAAAGGCAGAACTTCAAGATACAGAAGTTTCCAATAGGAACAGCCACAGTAGCAGTGTTCCTGGTTCAG TTCCAAGCCAGCTACAGAGCCCCAGAGCTCAGTGACCATATAGGTGGCTCGTTGGCTCTGTCTATAGTTAACAGCCCATGGCAGCA GATTTTGTTAGCCGGGGTTACCTGGTACTTCATCGGTGCAATGTTACTCCAGCTTGTGGAAGCTATCCAATCCAAGCAAGAAGAAG ATAAAGAAGCATAGACCTAATAGATATACAGTATATATGTATAGCGAAGATATTACTACAGTATATATACAACAAGAAAGTGCTTA TTGAAAATTTATTCCTGACAACAATTTTAAAATTGTATTTAAGAGTTCATAAGCATTATATATTAGTTGCC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_197715 DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana]	1955	1e-216
XP_002874118 DNAJ heat shock N-terminal domain-containing protein [Arabidopsis lyrata subsp. lyrata]	1924	4e-213
BAC42598 unknown protein [Arabidopsis thaliana]	1536	4e-168
XP_002310648 predicted protein [Populus trichocarpa]	1274	9e-138
XP_002272283 PREDICTED: hypothetical protein [Vitis vinifera]	1232	7e-133

Swiss-Prot top hits (Blast detail)	Score	e value
Q8G6C6 Chaperone protein dnaJ	146	2e-008
B2GBQ6 Chaperone protein dnaJ	136	3e-007
B8I304 Chaperone protein dnaJ	133	8e-007
A7X2Y0 Chaperone protein dnaJ	131	1e-006
A6U251 Chaperone protein dnaJ	131	1e-006

TrEMBL top hits (Blast detail)	Score	e value
Q9FMX6 At5g23240	1955	7e-217
Q8GXY8 Putative uncharacterized protein At5g23240/MKD15_10	1536	3e-168
B9HGK8 Predicted protein	1274	6e-138
A5ATZ2 Putative uncharacterized protein	1088	2e-116
B6SZJ9 DnaJ domain containing protein	979	1e-103

Arabidopsis top hits (Blast detail)	Score	e value
AT5G23240.1 DNAJ heat shock N-terminal domain-containing protein	1956	3e-219
AT2G42750.1 DNAJ heat shock N-terminal domain-containing protein	280	6e-025
AT4G36040.1 DNAJ heat shock N-terminal domain-containing protein (J11)	126	4e-007
AT4G13830.1 J20 (DNAJ-LIKE 20); heat shock protein binding	124	7e-007
AT4G13830.2 J20 (DNAJ-LIKE 20); heat shock protein binding	124	7e-007

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


9	6			50%


8	1			8%


15	1			8%


7	3			25%


11	1			8%

Unigene Members	Member information