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Information for unigene UN14631
| FASTA Sequence |
| Unigene ID: UN14631 | Length: 697 |
SSR | | CCTTGATAACCAAATGGTTCAATGCAAGTTCCGAACTTTTTGTCCTATCTACTACACTGATCACTCTTTGTCTTAGATCCTTTTAA
AGAACTCAGCTTGAGATTTTAATCCACAGCTTATACAAAACAACATTACAAAAAAAAAGAGTTGAATAATAGAAGAGAGCAAAGAG
TGATGATCATCAAACATTCTTGAGCTTCTTCATCTTGGAAGGTGGCCAACGACCCTTCTTCCTCAACTTACGCTTACGAACCAGAC
GTTTCCTCCGTAGCCTAATCTTCTTGGCCAGCTTCATCTTCATCCTCTGTTCAAGCAGAAGCTTCTCTTTACCTTCTTTTGATTCC
AATGGTAGTTTATCCACTGAGACAGCAGCAGCAGCAGCAACAGTCTTAGGTGGTTCCTCATTGCTCTCGGGCTCAGCTCCGTCCAC
GCCAGAAGCAGCTGCCTTCACAATTGGTGATCTTCCATGGCTATTGCTCAAACTGTAAGCACTGAGAAAGACTCTGTTCTTGTTGG
GTTTAAGGCTGAAAACTGGTGAAACGTAAGAGGAAAGTTGAAGCCTTGGAGGAGATGAAGAAGAGAGAGGAGCGAGAGAATTGAAA
CAGAGAAGACCCATCTTCTTCGAATTTTGAAGGATTTCTTTCGCCTTCAGAGCTTCTTCATGTGAAAGTTTGGTTTCTGGATAAGC
TCCTTCCCC
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| GenBank top hits (Blast detail) | Score | e value |
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| AAK68822 ribosomal protein, chloroplast [Arabidopsis thaliana] | 497 | 3e-048 |
| NP_191250 plastid-specific 50S ribosomal protein 5 [Arabidopsis thaliana] | 496 | 4e-048 |
| XP_002878118 hypothetical protein ARALYDRAFT_486132 [Arabidopsis lyrata subsp. lyrata] | 492 | 1e-047 |
| XP_002322592 predicted protein [Populus trichocarpa] | 265 | 2e-021 |
| NP_001148929 50S ribosomal protein L40 [Zea mays] | 254 | 4e-020 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LER7 50S ribosomal protein 5, chloroplastic | 496 | 2e-049 |
| P11891 50S ribosomal protein 5, chloroplastic | 222 | 1e-017 |
| P27684 50S ribosomal protein 5 alpha, chloroplastic | 202 | 2e-015 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9IHI7 Predicted protein | 265 | 2e-021 |
| B6T8T0 50S ribosomal protein L40 | 254 | 3e-020 |
| C6T3E4 Putative uncharacterized protein | 250 | 9e-020 |
| A2WNG6 Putative uncharacterized protein | 242 | 8e-019 |
| Q5NBK8 Os01g0278900 protein | 242 | 8e-019 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G56910.1 PSRP5 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5) | 497 | 1e-050 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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