Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN14644

FASTA Sequence
Unigene ID: UN14644Length: 2034 SSRSNP
GCTCTTGCAGTGGTTCTATCATGGGCCTCCATACTAACTCTCGGAGCAATGAAATTCTTACACTGGTCAAATCTCTGTTCCTCATT
GAAAGGCATAACAAGTTAAAGCTAGCACTCACGGGTCTCTCTACTTGTTTTGTTTTTTTTCAAAACAAAACAAACACTCCGACACA
AATCAAAACCCGACAAATCCACATTTCATGTGCTCTGCCCCTAACAAAAAGGTCCACAACCAAACCAACCAATCTTGTCTTTTACC
ACCTCTATAGCTGTATACCTTTTTTACTTCGCTTTCCCATATCCTTTTTAACCTCTTAAGGTCTCTCGGAAACAGAGAGAAAGAGA
CACTTTCACAGAAAGAAAATCATGGGCGTCTCTCTGTTCGTCGCCTTCACCCTTCTCTCACTCTGTTTGCACACTTCAACATCCGA
GCTTCTACGGTTTCAGCTCTCCACCATATCAGCTGCACCTTCGCTTTTGCCCGAAGCGCCTTCTAGTTTCTCAGCTTCACCTCCTC
TGGAGGCTATGTCTCCGGATATATCTCCTCTGTTCCCTACTCCAGGTTCGAGCGAAATGTCTCCTTCTCCGTCAGAATCTTCTGAG
ATGCCGACAATCCCATCAAGCCTTAGTCCACCAAACCCAGATGCTGTGGCTCGTGATCCCCTGCTAGACACTTCTCCGGTGGGGTC
TCCTCTGCCTGCATCTTCCTCTGTTTCTTTGGTCTGGTCACAACCCTCTCTGCTTCTTGTGTTCCCCATACTGCTGCAGCTACTAC
CTTTCTGAATATTCTCTAGTTAATCACTAAAAACAGAGGTTGACAATGTATTTTCCTTGTAGTTTGATATTATATACCTTTTTCTA
TTAATTGTTGGTATGAATGAAAATTGCTCATGAAGTACTCTCCTGCCATTTGGCTGGCTAGTGCAGTTGTTACTACTTGTAACTTG
TGTTATGGGTTTTGTGCCTCAAATTGATTGATCCAAATTATAAGTAATACTGTAAGAGTGTATCTCACATGTGGCTATCTGAAACT
GTGGCTTGCTTTGTTGTGATTGAACAAATAAGAGATGCATTAAGTGGGGTAGAGGATAATTACGCTAATCCAGGTTACAAATACAG
CACGAAACAAAAGATGTTTCAATCTTACAAAAAAAAAAAAAAAGAGTGGGTGAATCAAACACATAAAGAAAGAAAGTATTGTAGCC
AATGCTCATGAGGTATAATGAGGCATAGAAAGAGTTTCCTTGTTACCATGATGATGGCGCATTTCAAATGTAGAACAGCTTCCCGA
GGAACTTGTAGTCGAGATGGAAAAGAGTGCGAGACGCACCGGGAAGAAGAAGAAGAAGAAGACGTCTCTTGAGACTCGAGTTCTCG
TCCTTGAGGGTCTCAACAGCAAGAGAAAGCTGCCTGATGACCTCTCTCTTCTCCTCGTCTTTCTCTAACAGCTGTCTTCTCAGAGC
CTCACTCTCTTGGATCAGCTTCAACCTTTCTTGTTCCAGTTTGGAAGTGGAGGAGGCGTTTCCCTGGTCCTGGTCGTCTTCGTCTT
CTTCGTCAGGGTCTTCAATCTCGGAATGGGGATCATCGGAAAGAGAGTGGTCGATAGAGAAAGAGGAAGAGGATGATTTAAGGTGA
TGGAAACGGTGGGCTAAGGAACGGTGAGCACGATAGAAATCATGGACGAAGGAGATAAGCTCAGGACGTTTCTTGTAGTAAGTCTC
CGCACGCTGCCCAAAAGAATCTGCGTTACCCTCCTCGATTAGCGACAACATGGCATTTGTCTTTGAATCAAGCTCTGCAAGTGTGG
AATGAAGCCATTGCGATTGCTTAGAGGTCGTCGTCGTCGTCTTGTGATGACTCTCGAACCACCACCATCTCCTTTTCTCTTCTTCC
CCTCCAACCATATTTCTTTCTTCTTCGATCCAAGACTCTTCTTGTCTATCGTACAGCCTCTCCCCGTTCTTATTACAGTAGTAGAG
TAATGCGAATAACAGTAAATCTGTTTTCAAATTTTGAATTGTCTCTGTGTCCACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002880334 hypothetical protein ARALYDRAFT_904269 [Arabidopsis lyrata subsp. lyrata]5795e-057
AAL38270 unknown protein [Arabidopsis thaliana]5751e-056
NP_182313 kinase interacting-like protein [Arabidopsis thaliana]5714e-056
XP_002882137 hypothetical protein ARALYDRAFT_904270 [Arabidopsis lyrata subsp. lyrata]5096e-049
NP_566114 arabinogalactan protein 26 [Arabidopsis thaliana]4828e-046

Swiss-Prot top hits (Blast detail)Scoree value
Q94F57 Classical arabinogalactan protein 264994e-049
Q6IWY1 1-acyl-sn-glycerol-3-phosphate acyltransferase 21392e-007
Q9XFW4 1-acyl-sn-glycerol-3-phosphate acyltransferase 21331e-006
Q8LG50 1-acyl-sn-glycerol-3-phosphate acyltransferase 21293e-006

TrEMBL top hits (Blast detail)Scoree value
Q8VZA9 Putative uncharacterized protein At2g479205759e-057
O82259 Putative uncharacterized protein At2g479205713e-056
B9IBT7 Predicted protein3186e-027
B9I9W9 Predicted protein (Fragment)3024e-025
B9S3W8 Putative uncharacterized protein3024e-025

Arabidopsis top hits (Blast detail)Scoree value
AT2G47920.1 kinase interacting family protein5764e-059
AT2G47930.1 AGP26 (ARABINOGALACTAN PROTEIN 26)4993e-050
AT1G03470.1 kinase interacting family protein2691e-023
AT1G03470.2 kinase interacting family protein2691e-023
AT2G30500.1 kinase interacting family protein2305e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
104  22%
 
66  33%
 
114  22%
 
91  6%
 
123  17%

Unigene MembersMember information