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Information for unigene UN14645
| FASTA Sequence |
| Unigene ID: UN14645 | Length: 1181 |
| SNP | GAAGCATCAAACCGGTTAAGATTGTCAAGGTGGCTGTTTACCCCGGGAACGTGTTGTCTCTACACATGACGAAGCCACAAGGATTC
AAATACAAAAGTGGACAGTACATGTTCGTGAACTGTAGAGCCGTATCTCCCTTTGAATGGCATCCTTTCTCCATCACATCCGCTCC
AGGAGACGATAACGTGAGCGTACACATTCGCACTCTTGGTGACTGGACACGTAAGCTCAAGACCGTGTTCTCCGAGGTATGCAAAC
CTCCTACTGCCGGTAAAAGCGGTCTGCTCAGAGCGGATGGAGGAGACTCTATCGCCTTCCCAAAGGTCCTTATCGACGGTCCTTAC
GGTGCTCCCGCACAAGACTACAAAAACTACGACGTGGTACTCCTCGTAGGTCTTGGCATTGGAGCCACGCCTATGATCAGTATCCT
CAAGGACATCATCAACAACATGAAGTCGCATGACCGTGATAGTGACATCGAGAACAACAACAGTAATGGGAATAGTAAAGGGTTTA
AGACGAAGAAAGCTTATTTCTACTGGGTGACTAGAGAGCAAGGATCGTTTGAGTGGTTTAAGGGGATAATGGACGAGGTTTCGGAG
CTGGACGAGGAAGGAGTGATCGAGCTACACAACTATTGCACGAGTGTGTACGAGGAAGGAGATGCTAGGGTTGCTCTTATTGCTAT
GCTTCAGTCGTTGCAACACGCTAAGAACGGTGTTGATGTCGTCTCGGGGACACGGGTTAAGTCCCACTTCGCTAAACCTAACTGGA
GACAAGTGTACAAGAGGATCGCTGTTCAGCATCCCGACAAAAGAATCGGAGTCTTCTATTGTGGGGCACCAGGACTGACAAAGGAC
CTGAAAAATCTAGCTTTGGATTTCTCTCGAAAGACGAGCACCAAGTTTGACTTCCACAAAGAGAACTTCTAAATTCCAATTTATAT
CAATTGGGAGGAAGTTGCGTAGAGAATAAAACAAGAAACTGCATATAAATTTTCTTTTATAAAAAATATTTGAGTTGTATTCCTTC
GTTTCTTCTTTCCTACTTTTTGTTCAGTTTTACGGAATTTAGTCTATTGCCGAATTAAATATAAAATCGCAGAAGTATAGTTGCAG
ATTTGCTGATTTGGTATTGTGAACATGTAATATGGAGTCAATGCAACATAGTTTTCTGCTCGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002863831 hypothetical protein ARALYDRAFT_917612 [Arabidopsis lyrata subsp. lyrata] | 1535 | 3e-168 |
| NP_199602 respiratory burst oxidase-D [Arabidopsis thaliana] | 1529 | 2e-167 |
| AAC39479 respiratory burst oxidase protein D [Arabidopsis thaliana] | 1529 | 2e-167 |
| CBI29288 unnamed protein product [Vitis vinifera] | 1341 | 1e-145 |
| CBI29289 unnamed protein product [Vitis vinifera] | 1305 | 1e-141 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FIJ0 Respiratory burst oxidase homolog protein D | 1533 | 2e-169 |
| O81210 Respiratory burst oxidase homolog protein C | 1234 | 1e-134 |
| Q948T9 Respiratory burst oxidase homolog protein B | 1203 | 4e-131 |
| Q2HXK9 Respiratory burst oxidase homolog protein D | 1193 | 6e-130 |
| Q9SBI0 Respiratory burst oxidase homolog protein B | 1117 | 4e-121 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C1IHQ9 Respiratory burst oxidase-like protein | 1275 | 3e-138 |
| A5CBK9 Putative uncharacterized protein | 1220 | 7e-132 |
| B9RFA3 Respiratory burst oxidase, putative | 1219 | 1e-131 |
| A7DWR6 Respiratory burst oxidase homologue | 1197 | 3e-129 |
| Q5ENY3 Calcium-binding EF-hand; Ferric reductase-like transmembrane component (Fragment) | 1197 | 3e-129 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G47910.1 RBOHD (RESPIRATORY BURST OXIDASE HOMOLOGUE D); NAD(P)H oxidase | 1534 | 2e-170 |
| AT5G51060.1 RHD2 (ROOT HAIR DEFECTIVE 2); NAD(P)H oxidase | 1235 | 7e-136 |
| AT5G07390.1 ATRBOHA (respiratory burst oxidase homolog A); calcium ion binding | 1150 | 5e-126 |
| AT4G25090.1 respiratory burst oxidase, putative / NADPH oxidase, putative | 1120 | 2e-122 |
| AT1G09090.2 ATRBOHB (respiratory burst oxidase homolog B); FAD binding / calcium ion binding / electron carrier/ iron ion binding / oxidoreductase/ oxidoreductase, acting on NADH or NADPH, with oxygen as acceptor / peroxidase | 1118 | 3e-122 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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