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Information for unigene UN14651
| FASTA Sequence |
| Unigene ID: UN14651 | Length: 1696 |
| SNP | AAGTGCACTGAGCGAGATGATGGGACTGTTGGGTTTGCTCAGGAGTTGTTGAGTGATTTGTCTGGAGAAGCTAGGCGACAGGGGAT
CAAACCGTTTTCTGATGTGATCCAGAGTTTGTGCAGGATGAAGAATGTTAAAGACGCCAAAAGTTTGGTTCTGGATATGATCTCTA
AAGGACCTGCTCCTGGGAACGCGGTTTTTAATCTGATCGTCCATGCCGCTTCGAGAAGTGGAGATCTCGACGAAGCCAAAGAGGTC
TTGAAGTTGATGGAGGGAAGAGGTCTGAAACCGGACGTGTACACTTACACAGTCATCATCAGCGGGTATGCTAAAGGAGGGATGAT
GAACGAAGCTCAGGAGATACTAGCGGAAGCGAAAAAGAAACATGAGAGGCTTAGTCCCGTGACGTATCACTCGCTCATCCGAGGCT
ACTGCAAGATTGAAGAGTATGACAAAGCTCTTAAGCTTCTGAACGAGATGGAGAGTTTTGGAGTGAAGCCTAGTGAGGATGAGTAT
AGTAAGCTGATACAGTCGTTCTGCCTCAAAGCCTTGGATTGGGAGAAAGCAGAGATGCTGTTTGAGGAGATGAAGCAGAAGGGCTT
GCACCTCAATGCTATTACTCAGGGGCTGATAAGAGCAGTTAAAGAAATGCAAACTGAAGGCAAGGCAACCGAAGATGTTAATCTAC
TTGCTACATCGTAGAACTTGGATTCAAGATTTTTCCATTTGTTCCTAATCAAATCTGGAATAGTTTTTTGAAGATGTTTTCTCTTG
GTTTGAAACTCCAGACAATGCCTTGTTTGTTCTCCAATAAGCTTCTATGGTGTTCAATAGATGATTTTTCATCATAAAATAATTTC
AAATTCATAAACTTATTAATGATTCAATGCTAATAGCAGATTTTTTATAAATAGATAGAAAAATCAGGAAATTCTGACGACCACTT
TGTTCTTTTTGCCTGAAGAGAGAACAAGACCTTTCCCTTCAACAATATCATCTTCTTCAACTCTCTTGTTCTCATCTTCAACTCTC
TCATTGTTCATATAAACCCCACCTTGCTTCAACGTTCTCCTTGCTGCAGACTTGCTCTCAAACAACCCTGCAGAAACCGACACATC
AACAATGGAAACACCTGAGACTCTATCAACAGGCAGTGAGCAAGTTGGTATATCCTCTGCAATTCTCTCAATCAAGTTCCAGTCAA
GCTTTGTCTCAGCTCCTGGTCTTAAAGCCTCTGTTGCCTTGATTGCTTCCTTCAAACCATCTTCACCATGTACAAATCGTGTTACT
TCTTCAGCCAGTTTCATTTGCGCGGTGTTAGGGACATAACCAGGCTTCCTCATCTCATCTTCCAAGTTCCTTATCTCATCCAAACT
CAGGAACGTCAACGTCTTCAAGAAGCGTATCACATCAACGTCTGGAACTGAGAAGAAGTACTGATAGAACTTATAAGGCGATAGCA
TGGAAGGAGACAGCCAGATGGCTCCATCTTCAGACTTCCCGAACTTAGTCCCATCGTTTTTCAGCAGGAGAGGAAACGTTAGCCCG
TAAGAAGCTTCTTCGGTCTGGAGAATCTTACGTATCAGATCAGTTCCAGCTGTTATGTTACCCCACTGATCACTCCCACCTATCTG
AACATTAACCCCTTCCTTGTCGAACAAGTGAACGAAGTCATAGCCTTGCAATAACTGATAGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002884331 tRNA synthetase class I family protein [Arabidopsis lyrata subsp. lyrata] | 1217 | 4e-131 |
| NP_186915 tyrS tyrosyl-tRNA synthetase [Arabidopsis thaliana] | 1211 | 2e-130 |
| XP_002512791 tyrosyl-tRNA synthetase, putative [Ricinus communis] | 1026 | 6e-109 |
| XP_002265238 PREDICTED: hypothetical protein [Vitis vinifera] | 1019 | 4e-108 |
| XP_002882245 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1019 | 4e-108 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P0C896 Pentatricopeptide repeat-containing protein At3g02650, mitochondrial | 1016 | 3e-109 |
| Q6MC06 Tyrosyl-tRNA synthetase | 747 | 5e-078 |
| Q74LL0 Tyrosyl-tRNA synthetase | 547 | 8e-055 |
| Q5FMI6 Tyrosyl-tRNA synthetase | 540 | 5e-054 |
| A8YX30 Tyrosyl-tRNA synthetase | 529 | 1e-052 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9M876 At3g02660 | 1211 | 1e-130 |
| B9RGT2 Tyrosyl-tRNA synthetase, putative | 1026 | 4e-109 |
| A5C3T3 Putative uncharacterized protein | 1002 | 2e-106 |
| A2WQF7 Putative uncharacterized protein | 976 | 2e-103 |
| A2ZTJ0 Putative uncharacterized protein | 976 | 2e-103 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G02660.1 emb2768 (EMBRYO DEFECTIVE 2768); ATP binding / RNA binding / aminoacyl-tRNA ligase/ nucleotide binding / tyrosine-tRNA ligase | 1212 | 5e-133 |
| AT3G02650.1 pentatricopeptide (PPR) repeat-containing protein | 1017 | 2e-110 |
| AT5G61400.1 pentatricopeptide (PPR) repeat-containing protein | 269 | 1e-023 |
| AT4G11690.1 pentatricopeptide (PPR) repeat-containing protein | 266 | 3e-023 |
| AT1G05670.1 UDP-glucoronosyl/UDP-glucosyl transferase family protein | 263 | 6e-023 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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