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Information for unigene UN14660

FASTA Sequence
Unigene ID: UN14660Length: 786  SNP
GGGTTTTCCTCCGTAACAGACGCCATGGGTATCGATCTTATCGCCGGAGGTAAGAGCAAGAAGACCAAAAGGACAGCTCCAAAGTC
CGATGATGTCTACCTCAAGCTTCTCGTTAAGCTGTACCGGTTTTTGGTAAGGAGAACCGGAAGCAAGTTCGACGCAGTGATCCTCA
AGAGGCTTTTCATGAGCAAAGTCAACAAGGCTCCTCTCTCGCTCTCCAAGCTCGTTGAGTTCATGAACGGCAAGGATGGTAAGATT
GCTGTGTTGGTTGGGACAATCACTGACGATTTGAGAGTTCATGAGATTCCTGCCATGAAGGTTACTGCCTTAAGGTTTACGGAGAG
AGCTAGGGCTAGGATTGAGAAAGCTGGTGGAGAGTGCTTGACCTTTGACCAGCTAGCTCTCGTTGCTCCGTTGGGACAGAACACGG
TTCTCCTAAGAGGACCGAAGAACTCTCGTGAGGCAGTGAAGCACTTTGGTCCAGCTCCTGGTGTGCCACACAGCCACTCGAAGCCT
TATGTTAGGTCTAAGGGAAGGAAGTTTGAGAAAGCTAGAGGAAAGCGAAAGAGTCGTGGTTTCAAGGTCTAAGAAAGTCCTCAAAA
CTGTTTCGAGCTTCTTGTTTCCTTATGGTTGTTGCTGCTTTCAGAATCGAAGTTTTTTGTAGACCGCTTATTGTTACTCTTTGCCT
TTTGCAGACATTGTTTTGAGTTTTCTGTCTTTCTGTTCTAATCGACAATTGAATGTTTTTGCTTCCGCCAATATTCTTGATATAAA
AATTAGAGGCCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_187210 60S ribosomal protein L18-2 [Arabidopsis thaliana]8935e-094
AAA69928 cytoplasmic ribosomal protein L18 [Arabidopsis thaliana]8901e-093
XP_002882427 hypothetical protein ARALYDRAFT_477850 [Arabidopsis lyrata subsp. lyrata]8901e-093
NP_198137 60S ribosomal protein L18-3 [Arabidopsis thaliana]8854e-093
XP_002874343 60S ribosomal protein L18 [Arabidopsis lyrata subsp. lyrata]8792e-092

Swiss-Prot top hits (Blast detail)Scoree value
P42791 60S ribosomal protein L18-28932e-095
Q940B0 60S ribosomal protein L18-38852e-094
O22254 Putative 60S ribosomal protein L18-17785e-082
O65729 60S ribosomal protein L18 (Fragment)7614e-080
Q4PM04 60S ribosomal protein L186217e-064

TrEMBL top hits (Blast detail)Scoree value
A5BIA1 Putative uncharacterized protein8566e-090
B9GSC1 Predicted protein8512e-089
A9PBR7 Predicted protein8494e-089
B9SAT7 60S ribosomal protein L18, putative8494e-089
A9PAJ5 Predicted protein8477e-089

Arabidopsis top hits (Blast detail)Scoree value
AT3G05590.1 RPL18 (RIBOSOMAL PROTEIN L18); structural constituent of ribosome8941e-096
AT5G27850.1 60S ribosomal protein L18 (RPL18C)8861e-095
AT2G47570.1 60S ribosomal protein L18 (RPL18A)5535e-057

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
1111  58%
 
64  21%
 
192  11%
 
201  5%
 
11  5%

Unigene MembersMember information