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Information for unigene UN14664
| FASTA Sequence |
| Unigene ID: UN14664 | Length: 934 |
| SNP | GGATGTAACAAAATTTTATTATTGGAAAATGTTTTGTAAAACGTGTATTATTGCAACCATACATGTTCATTTTGAAGGTAACTCAA
AGACCAAAGAGACATTGTACGTTTGTTTCAGACAAACTTATAAAAACAAAGCCGAGCTGGGAACTGGTTCCTCTCTTTATGTTTGT
TATCATGTAAAGACCTCATCACTTGCATTCCTTCTCATAAACTTCGCTTGCATATTTCCAGTTGATGACTTTCCACACGTTCTTCA
GATACTCCGGCCTCACATTCTTGTACTGCAAGTAGTAGGCGTGCTCCCAAACATCTATACCCACCAGAGGAACCAAGCTTCCTCCT
TTCGTCACAAGTGGATCCTGATTTGCGGTTGTGTCAACCACAAGCTTCTTAAGCTCTTTGTCTAAACCGAGCCACACCCATCCTGA
GCCTTGCACAGCAGCACCTTCAGCACTCATCTTCTTCACCAAACCTTCGAGAGAGCCAAAATGAGTATCAATAGCTCCACCAAGAG
ATCCCTTCGGTGGCTCTCCACCACCTTCCTTTACAGGAGCAAGGTTCTTCCAGAAAATCGAGTGGTTCACATGACCTCCGCCGTTG
AACTTGATGGCGCTCTGCAGCTTAACGACAGCGGAAGCGTCTCCCTTGTTGACGGCCTGATCGAGCTGCTCGAGGGCATTGTTGTA
ATTAGTGACGTAAGCCTGGTGATGCTTCTGGTGATGGATCTGCATGATCTCGCCGCTGATCGCCGGCTCCAACGCGCTGTAATCAT
AGGGGAGATCAGGAAGCGTGAAGGTCTGGATTCCTCGGAAACCAAGAAGCCTCGAAGATGTCTCCTTTAGGCCCGCTAGGGTTCTT
CTGCTGGCTACGGAACGAATCGCCATTGTTGATAGATAGATAGATGATGAGATACACAGTGAGAGTCTCTCCTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAL07333 superoxide dismutase [Raphanus sativus] | 1195 | 6e-129 |
| AAC15806 superoxide dismutase [Raphanus sativus] | 1192 | 1e-128 |
| ACA50527 putative manganese superoxide dismutase 1 [Brassica napus] | 1187 | 5e-128 |
| XP_002882704 hypothetical protein ARALYDRAFT_478433 [Arabidopsis lyrata subsp. lyrata] | 1179 | 4e-127 |
| AEB00557 manganese superoxide dismutase 1 [Brassica juncea] | 1177 | 7e-127 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O81235 Superoxide dismutase [Mn], mitochondrial | 1152 | 3e-125 |
| P35017 Superoxide dismutase [Mn], mitochondrial | 975 | 9e-105 |
| P11796 Superoxide dismutase [Mn], mitochondrial | 972 | 2e-104 |
| Q9SM64 Superoxide dismutase [Mn], mitochondrial | 967 | 7e-104 |
| O49066 Superoxide dismutase [Mn], mitochondrial | 956 | 1e-102 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q947R3 Superoxide dismutase | 1195 | 4e-129 |
| O65324 Superoxide dismutase | 1192 | 9e-129 |
| B1PRJ9 Superoxide dismutase | 1187 | 3e-128 |
| B0L8Q0 Superoxide dismutase | 1176 | 7e-127 |
| A1YW89 Superoxide dismutase | 1171 | 2e-126 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G10920.1 MSD1 (MANGANESE SUPEROXIDE DISMUTASE 1); metal ion binding / superoxide dismutase | 1152 | 2e-126 |
| AT3G10920.2 MSD1 (MANGANESE SUPEROXIDE DISMUTASE 1); metal ion binding / superoxide dismutase | 1136 | 2e-124 |
| AT3G56350.1 superoxide dismutase (Mn), putative / manganese superoxide dismutase, putative | 841 | 3e-090 |
| AT5G23310.1 FSD3 (FE SUPEROXIDE DISMUTASE 3); superoxide dismutase | 285 | 8e-026 |
| AT4G25100.1 FSD1 (FE SUPEROXIDE DISMUTASE 1); copper ion binding / superoxide dismutase | 268 | 7e-024 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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