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Information for unigene UN14667
| FASTA Sequence |
| Unigene ID: UN14667 | Length: 1274 |
SSR | | GGGGATCTCTCGCCCCCAAATCCTCCTCACAAGAGAAAACCCTTAACACACTTCTTCTTCTTCTTCTTCCCCTCTCTCTCTAACTC
TCGCCGTAAGTGATTTTTTTTCGGTAGCGACGGCGATGGCGGATCTTTTCCCACCTCTCGTGACGGCTCAAATCGACGACAAGCCT
AAAGTCGACGAGAAAGTCGATTACTCGAATCTCCCTTGCCCTGTTCCCTATGAAGGAACTCCACCGCGAAGCTTACATGTCTTTAA
AGCCAGACACTTTTGAGGGTCTACGCTTCGACTTTACCAAGGGGTTGAATCAAAAGTTTGGTCTCTGCCACAGTGTAATGATGGGG
CCAACCGAAGTTCCTTCTCAGTCGCCTGACACGGTGATTAAAATTCCAACTGCCCATTATGAGTTTGGTGCCAATTATATTGACCC
GAAGTTGATGCTTGTTGGAAGGGTTATGACTGATGGTAGACAAAGTGCAAGAGTGAGAGCTGATTTAACTGATAAGTTGATGGTGA
AGGCGAATGCTCAGCTGGCAAATGAGCCTCATATGTCGCAAGCAATGTTCAACTTTGATTACATGGGATCAGACTACAGAGCCCAA
CTTCAATTTGGGAACAATGCTCTAGTTGGAGCAAACTATATTCAGAGTGTGACACCCCGTCTATCTTTGGGTGGGGAAGTTTTCTG
GGTTGGTGTCCCTCGGAAGTCGGGTATAGGTTACGCTGCAAGATACGAAACTGATAAGATGGTCGCCTCTGGGCAAGTTGCTAGCA
CTGGTCTTATGGCTATGAACTATGTTCAGAAGGTTTCCGATAAGGTCTCACTTGCCACTGATTTTATGTACAACTACTTTTCAAGA
GAAGCTGTAGCTAGTGTTGGGTATGACTACATGCTGAGACAGTTTCGTGTGCGGGGAAAGATAGATTCGAACGGTGTTGCATCGGC
TTTTTTGGAAGAACGATTGAGTATGGGACTCAATTTTTTTATGTTTGCAGAGCTTGACCATAAGAAGAAGGACTACAAGTTTGGAT
TCGGTTTAACAGTCGGCTAATAAGCACAGCGACGCACGGAATAAGCCCTGGCAGCTGCAGCTGTTTGTGCGGGGGAATCGGTTCAA
TTTTATTATATTTTCTCCCTTCAAGATTTCAGTTTAGGCTATTTTCGTTGGGAAGTTGAACAAAAAAACAAAGGAAAAGTTGTGTT
GTTTATTTTCGGTTTAGGTTTTCTCTCCAACAACATCCAATTAAAGGAGGTTTTTTTTTGTGTTTTTACT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_188634 mitochondrial import receptor subunit TOM40-1 [Arabidopsis thaliana] | 1220 | 1e-131 |
| XP_002883221 hypothetical protein ARALYDRAFT_479518 [Arabidopsis lyrata subsp. lyrata] | 1194 | 1e-128 |
| XP_002513130 mitochondrial import receptor subunit tom40, putative [Ricinus communis] | 1152 | 9e-124 |
| XP_002319995 predicted protein [Populus trichocarpa] | 1127 | 7e-121 |
| XP_002310364 predicted protein [Populus trichocarpa] | 1122 | 3e-120 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LHE5 Mitochondrial import receptor subunit TOM40 homolog 1 | 1220 | 5e-133 |
| Q9SX55 Putative mitochondrial import receptor subunit TOM40 homolog 2 | 928 | 4e-099 |
| Q9U4L6 Mitochondrial import receptor subunit TOM40 homolog 1 | 256 | 3e-021 |
| Q9CZR3 Mitochondrial import receptor subunit TOM40B | 239 | 3e-019 |
| A4F267 Mitochondrial import receptor subunit TOM40B | 238 | 4e-019 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RGH8 Mitochondrial import receptor subunit tom40, putative | 1152 | 6e-124 |
| B9IBJ6 Predicted protein | 1127 | 5e-121 |
| B9HG93 Predicted protein (Fragment) | 1122 | 2e-120 |
| A5ASV4 Putative uncharacterized protein | 1115 | 1e-119 |
| A2XG58 Putative uncharacterized protein | 1063 | 1e-113 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G20000.1 TOM40; P-P-bond-hydrolysis-driven protein transmembrane transporter/ voltage-gated anion channel | 1221 | 3e-134 |
| AT1G50400.1 porin family protein | 928 | 3e-100 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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