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Information for unigene UN14674
| FASTA Sequence |
| Unigene ID: UN14674 | Length: 1456 |
SSR | | GGGACCAATTCGGAGAGAGAGAGCGACGGAGATGGTTTTTGTTTGACATTTTTCGAAAACCGAGATTATTTTTTGTTGTTGTTGTT
GTTGTTGTGTGTTCCCTCCGATCGAGGCTAGGCTAGGCTAGGCTAGGCTAGGTGGAGATAGAGATGGCCGGAGCTAATGATGATGA
TGATGATGATCGTAACAACCAATCGACGGCACATGTCCGTGGAAAACGCGGGAACAAGGAGGAGGAGGAGGAGGAGGATTCTTCTA
CTCTTGTTTAAATCTCGTGCTCGATATGCCTCGAGTTGGTGATCGACGACGGTTCCAGATCCATGGCTAAGCTCCAATGTGGTCAC
CAATTCCATTTGGACTGCATCGGATCCGCTTTCAACATTAAAGGAACCATGCAATGCCCTAACTGTCGTAATGTTGAAAACGGTCA
GTGGCTATTTGCCAATGCTTCTTCTACTCGTCTTTTTCCTGAGTTTGTCATGGAAGATTGGATCCCTGATGAAGATTTGTATGCTT
TAAGCTATCCTGAAATGCAATATCGGGTCCATTGGTGCCCCTTTGGTGAGCTCTCTCAAGCTGCTTCATTCGATGAACTGGAACCT
TCAGCCACTACATATCATAATGAGTTCCATGGTCACCATGCCGTTGCTATGAACCATTCATATCCTGCATACGTTGCACCAGGCCC
AGCCTCCACTCCAAGAACTAGGGATAACAGCAACAACGCAGATGACCATCCCTGGAACAACAGCCACTCTACTGACCACTTTCACC
AGCTCTCTGTTGCTCCCCACTATCACTATCACCATCACCATCATCATTCTACATCGTTTTCTCTTCCAGCTGCTCATGTAATTGAT
GGTGAAATCGACTCTTCAGCAACACGGGGCATTTCTCATCCACACCCATTTCTCTTTAGTTATCGGTCTAGTCCAAGAACCTCACC
AGCAGCTAACACTCAACAAGGAAGCAGCAGCGCTGTGCAAATGCGTGAACACCTTCACACGCAGCAGCATCATGTTTATAGTAACC
AGAGGCAACATCATCATGTTAATGGTCCCAATCTCGCACCACCTCCTCTGGTCTCTGTGACAAGAAGGGGACTACAGCCACTACCA
ACGCCAGATCAGAACGTTGGATTCTTCATTTATCCACCACCACAAGCACCGAGCACCTCAGGTGAACGAGAAAGCGATCAGTTTCA
TCCTTGGGAGAGAGATTGGTTTCCACATTTCCCTCTCCCCTCGATTCACCGCACAATCTCTAGCTTCTGGCACAGACACTTTTGAG
AGAAGAAATCTTACCAGGTGTATGAACAATGTATAAAAAGATGAAAACTGGGGACTTGTTTGATGAATCAAAACTTGTTTATGATG
TAACTATAACTTGGTTTTCCAATGTACATTTGTGGCCTTGCCAAGAATCGTTGGTTATTAAACAGAAAGATTCAACCCAG
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_850478 RING/U-box domain-containing protein [Arabidopsis thaliana] | 1303 | 3e-141 |
| XP_002882128 zinc finger family protein [Arabidopsis lyrata subsp. lyrata] | 1288 | 2e-139 |
| XP_002512438 DNA binding protein, putative [Ricinus communis] | 563 | 2e-055 |
| XP_002523069 DNA binding protein, putative [Ricinus communis] | 559 | 6e-055 |
| XP_002268579 PREDICTED: hypothetical protein [Vitis vinifera] | 516 | 6e-050 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8MP30 Uncharacterized histidine-rich protein DDB_G0274557 | 125 | 6e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| O82239 At2g47700 | 1303 | 2e-141 |
| B9RFB9 DNA binding protein, putative | 563 | 2e-055 |
| B9SAQ0 DNA binding protein, putative | 559 | 4e-055 |
| B9I7H8 Predicted protein (Fragment) | 480 | 6e-046 |
| B9N4J3 Predicted protein | 469 | 1e-044 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G47700.1 zinc finger (C3HC4-type RING finger) family protein | 1345 | 2e-148 |
| AT3G05545.1 transcription factor, putative / zinc finger (C3HC4 type RING finger) family protein | 400 | 6e-039 |
| AT2G15260.1 zinc finger (C3HC4-type RING finger) family protein | 226 | 1e-018 |
| AT4G13490.1 zinc finger (C3HC4-type RING finger) family protein | 199 | 1e-015 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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