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Information for unigene UN14707
| FASTA Sequence |
| Unigene ID: UN14707 | Length: 3678 |
| SNP | GCTGCTTGTCGAGAGTTTGGAAAATCTCATCTTGAGATATTTAGCTTTCGACCACGGGAAAAGAAGCTGAAATAGTAGGAGTTTAC
CTTATAGCAGGACACTCGCCCGTTGACAACTCTTTCTTAGGTTACTAATCGGTGACTTGCTTCGCCCAGGGGAATTCTATACTGTT
TCATTCCTGTTGGTTCAGGCCTCCTCTTCCATCCCGTGTTCTACTTACATTCAAATTGAGTGCTTTTTTTTTGTCTCCACTTGAGT
CTTAGTTACTGGTAGCAATTTCATGACATTGCCCCACTGTAACTGGACAGCCAAATCGTACATCCTAAATATTATCCCGTACCTGA
ACGAATCATCCATGTTCGCAGGTCGGTAATATGTACGGATAAAGATCGGCACATCCATAAAGACTTCAAGCTCTATACTGGCACTA
AGCCTTAGCATACAATTCCATCTTTGATACTCCAGATAAAGCTTCATCCACCCATGGTACAGAGTGTATTCATTGAATACTTCCAT
ACCTGGATAGGCAACACCTCACTAGGAGGAAGTCTCGACTGAAAGAAGAGGAGGAAGGATAGGATCTTTCGGAGTATAGTGCTCCA
AAAGAGTCCAAATTATCCTACCCTCCACATGAGGGTGCAATGGAGCACCTAACACCGTGGATAACCCAATACGCAAGCTACTTTTA
TTTGAGTGCGCATGGATCCTCATCACCATCAGCCTCTTCATAAAACGTTTGTGTCGAAGAGACGAAGGTTCCCGCGGTTCAGAATG
AGCTTCTGCGCCGGTAAGCCCCCGAATCTTACTCAGTGGGCATCATAAAGAGCTCTAAAGGGGTGTGAGAGGACCGGAAAATAATG
AGTCAAGCCTGAAAAGAAAGTCGAACCGCGAAGGCAAGTATCCTCGCCCCCGCGATGGGAACTTTCAATAAAGCACAGTAGAGTGC
TTTACCTACCAGAGGTATCTATAGAATGAAAGAATCATTTTATGCTTCCTTGGCCATGTACAACATGGATTAGCATTATGTCATTC
CTACAATTCCTACAAGTGATCCACCTTCCAGTATTTGAAGGAGAGGACTTCGATATATTATATAATATGTTTCTTTCCATTCCTCG
TGAGCCACTTATTTCTCCGAAACAAGAGATCAAAGTGATTTTCCTCCTTTTTCCCAATAAGTCGACGGCCTTACACCATTGGGATA
CTTCGAATAAACTAGCATACATATAGGATACACCAGTGCTAAAACCTTTTCTCAAGAGATCTTCCAAACTGTTGGGGTCCTTGCTC
TGGATGGTCTTCCCCCGGTGTGAAAGCAGTTGGTTCCGTAGTTTTAGAATTCTGCTGATCCCAAGTACTCCATCTCCATCATTGCA
TATGAAAATATAGAAAGTAAAGAAGAAAAGGCATAACCAGAAGAATTGTGAAAAATAAGTGAATTTATCCAGTTGAGGCATGATTA
GATTAATTGATTTCAACAAAATGATTCCCTCCAGACAGCTTCACTCCGTCAAGCCTCTAGGAGTAGTGAAGAACTATAGAAAGTTG
TGGTTGGTTGTTGACCAACAAAAGCATGGGAGAAAACCAAGAAAAAGGGGGCATAGAGATTTCTTCTCTTATGAGATTGATAGTTT
GATCGCGGGGGCGGCCCGGCAGGCTAGCGATCAGAAAAGAAAATCGATTCTATATACGTTATGGTATGGAAAAAGATCTGACTTCG
TTAGAAGAAGATGAGCTGCCTAGATCTTTGTATGTCCAGGTCTCGGTAATTGAAGAAAGAATGCCCAGGTGATTAAGCCCGGTAAG
ACCCCGTGATAAGACATCTTCCGCAATACAAAATAACAACGGGAGATAAAGGATCCCCCTGTCTCACACCGCCTAACATGAGAAAT
ATCCTTTTGGAGAACCATTAACCAAGACAGAGAGCTTGGCAGCGTCGAGGTGCTAAAGCACCTCTCCTTTGCTGTTCGAGTAAACA
AGAAATGCTCGAGTTACTAAACACCCCCTAGGGGGCCCCTCTCTGATAAGGAAAAAAACGAAAAAATCTCAAATTTATGAAAAATC
TGGTTCGATGGCTGTTCTCCACAAACCACAAGGATATAGGGACTCTCTATTTCATTTTCGGTGCCATTGCTGGAGTGATGGGCACA
TGCTTCTCAGTATTAATTCGGATGGAATTAGCACGACCCGGCGATCAAATTCTTGGTGGGAATCATCAACTTTATAATGTTTTAAT
AACAGCTCATGCTTTTTTAATGATCTTTTTTATGGTTATGCCGGCGATGATAGGTGGATTTGGTAATTGGTTTGTTCCGATTCTGA
TAGGTGCACCTGACATGGCATTTCCACGATTAAATAATATTTCATTCTGGTTGTTGCCACCAAGTCTCTTGCTCCTATTAAGCTCA
GCCTTAGTAGAAGTAGGTAGCGGCACTGGGTGGACGGTCTATCCGCCCTTAAGTGGTATTACCAGTCATTCTGGAGGAGCAGTTGA
TTTAGCAATTTTTAGTCTTCATCTATCTGGTGTTTCATCCATTTTAGGTTCTATCAATTTTATAACAACTATCTTCAACATGCGTG
GACCTGGAATGACTATGCATAGATTACCCCTATTTGTGTGGTCCGTTCTAGTGACAGCATTCCTACTTTTATTATCACTCCCGGTA
CTGGCAGGGGCAATTACCATGTTATTAACCGATCGAAACTTTAATACAACCTTTTTTGATCCCGCTGGAGGGGGAGACCCAATTTT
ATACCAGCATCTCTTTTGGTTCTTCGGTCATCCAGAGGTGTATATTCTCATTCTGCCTGGATTCGGTATCATAAGTCATATCGTTT
CGACTTTTTCGGGAAAACCGGTCTTCGGGTATCTAGGCATGGTTTATGCCATGATCAGTATTGGTGTCTTAGGATTTCTTGTTTGG
GCTCATCATATGTTTACTGTGGGCTTAGACGTAGATACCCGTGCCTACTTCACCGCAGCTACCATGATCATAGCTGTCCCCACTGG
AATCAAAATCTTTAGTTGGATCGCTACCATGTGGGGGGGTTCGATACAATACAAAACACCCATGTTATTTGCTGTAGGATTTATCT
TTTTGTTCACCATAGGAGGACTCACTGGAATAGTCCTGGCAAATTCAGGGCTAGACATTGCTCTACATGATACTTATTATGTGGTT
GCACATTTCCATTATGTACTTTCTATGGGAGCCGTTTTTGCTTTATTTGCAGGATTTTACTATTGGGTGGGTAAAATCTTTGGTCG
GACATACCCTGAAACTTTAGGTCAAATCCATTTTTGGATCACTTTTTTCGGGGTTAATTTGACCTTCTTTCCTATGCATTTCTTAG
GGCTTTCAGGTATGCCACGTCGTATTCCAGATTATCCAGATGCTTACGCTGGATGGAATGCCCTTTCCAGTTTTGGCTCTTATATA
TCCGTAGTTGGGATTTGTTGTTTCTTCGTGGTCGTAACAATCACTTTAAGCAGTGGAAATAACAAAAGATGTGCTCCAAGTCCTTG
GGCTCTTGAACTTAATTCAACTACACTGGAATGGATGGTACAAAGTCCTCCTGCTTTTCATACTTTTGGAGAACTTCCAGCTATCA
AGGAGACGAAAAGCTATGTGAAGTAAAAGAAGAAAAGGTCGCCGACTGCTACTAAGAACCTAACAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_085587 cytochrome c oxidase subunit 1 [Arabidopsis thaliana] | 2800 | 0.0 |
| AAP58356 cytoplasmic male sterility-associated cytochrome oxidase subunit I [Brassica juncea] | 2788 | 6e-313 |
| YP_003587346 cytochrome c oxidase subunit 1 [Cucurbita pepo] | 2787 | 6e-313 |
| AAW55635 cytochrome oxidase subunit I [Brassica juncea] | 2785 | 1e-312 |
| YP_003587228 cytochrome c oxidase subunit 1 [Citrullus lanatus] | 2784 | 2e-312 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P60620 Cytochrome c oxidase subunit 1 | 2800 | 0.0 |
| P60621 Cytochrome c oxidase subunit 1 | 2800 | 0.0 |
| P24794 Cytochrome c oxidase subunit 1 | 2761 | 4e-311 |
| P14578 Cytochrome c oxidase subunit 1 | 2704 | 1e-304 |
| P05502 Cytochrome c oxidase subunit 1 | 2695 | 2e-303 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q6WAV9 Cytochrome c oxidase subunit 1 | 2800 | 0.0 |
| Q6YSM3 Cytochrome c oxidase subunit 1 | 2800 | 0.0 |
| Q7YFE1 Cytochrome c oxidase subunit 1 | 2788 | 4e-313 |
| D5I3H0 Cytochrome c oxidase subunit 1 | 2787 | 4e-313 |
| Q5I7E5 Cytochrome c oxidase subunit 1 | 2785 | 9e-313 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| ATMG01360.1 cytochrome c oxidase subunit 1 | 2801 | 0.0 |
| AT2G07707.1 hydrogen ion transmembrane transporter/ hydrolase, acting on acid anhydrides, catalyzing transmembrane movement of substances | 838 | 3e-089 |
| ATMG00480.1 Encodes subunit 8 of the mitochondrial F(O) ATP synthase complex. | 838 | 3e-089 |
| AT2G07708.1 unknown protein | 431 | 5e-042 |
| ATMG00500.1 hypothetical protein | 431 | 5e-042 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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