 |
Information for unigene UN14788
| FASTA Sequence |
| Unigene ID: UN14788 | Length: 812 |
SSR | | GGGCCATTCTCTTTTCTGTGGACGAAACTTAACCTTTAAAAGAAGGAACCAGAGAACGAGAGCCAGATAGAGCATTAGCCTTAGTA
GAGAGAGAGAGAGAGCTCGCTTGTCTCTGAAAGAATCCACAAAAGATATTATGGCATTGAAGCTTAACCCTTTGGCATCTCAGCCT
TACAACTTCCCTTCCTCGGCTCGTCCGCCAATCTCTACTTTCAGATCTCCCAAGTTCCTCTGCCTCGCTTCTTCTTCTCCGGCTCT
CACCTCCAAGGAGGTTGAGACTTTGAAGAAGCCATTTACGCCACCAAAGGAAGTGCACGTTCAAGTCCTGCACTCCATGCCACCCC
AGAAGATCGAGATCTTCAAATCTATGGAAGGCTGGGCCGAGCAGAACCTTCTCACTCATCTCAAGGACGTGGAGAAGTCGTGGCAG
CCCCAGGACTTCTTACCCGACCCTGCATCCGACGGGTTCGAAGATCAGGTGAGAGAGTTAAGAGAGAGGGCGAGAGAGCTCCCTGA
TGATTACTTTGTGGTTCTGGTGGGAGACATGATCACGGAAGAAGCGCTTCCGACCTATCAAACAATGCTGAACACTTTGGATGGAG
TGAGAGATGAAACTGGTGCTAGCCCCACTTCATGGGCTATTTGGACAAGAGCTTGGACTGCAGAAGAGAACCGACACGGTGATCTT
CTCAATAAGTACCTTTACTTGTCTGGTCGTGTTGACATGAGGCAGATTGAAAAACCATTCAGTACTTGATGGTTCAGGATGGATCC
AAGACAGAGACAATCCTTACCTTGGCTTCATCTACACT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| P29108 RecName: Full=Acyl-[acyl-carrier-protein] desaturase, chloroplastic; AltName: Full=Stearoyl-ACP desaturase; Flags: Precursor | 1044 | 1e-111 |
| AAD40245 plastidic delta-9-stearoyl-acyl-acyl carrier protein desaturase [Brassica juncea] | 1018 | 2e-108 |
| BAJ34062 unnamed protein product [Thellungiella halophila] | 1010 | 1e-107 |
| CAA52786 Stearoyl-acyl carrier protein desaturase [Brassica napus] | 1005 | 5e-107 |
| XP_002880063 hypothetical protein ARALYDRAFT_903770 [Arabidopsis lyrata subsp. lyrata] | 994 | 9e-106 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P29108 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 1044 | 7e-113 |
| Q01771 Acyl-[acyl-carrier-protein] desaturase, seed specific, chloroplastic | 981 | 1e-105 |
| P22337 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 867 | 2e-092 |
| P32061 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 827 | 1e-087 |
| Q42770 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 800 | 1e-084 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9XQR7 Acyl-[acyl-carrier-protein] desaturase | 1018 | 1e-108 |
| Q39355 Acyl-[acyl-carrier-protein] desaturase | 1005 | 3e-107 |
| O22832 Acyl-[acyl-carrier-protein] desaturase | 988 | 3e-105 |
| Q94AE9 Acyl-[acyl-carrier-protein] desaturase | 988 | 3e-105 |
| Q6DUV7 Acyl-[acyl-carrier-protein] desaturase | 985 | 7e-105 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G43710.1 SSI2; acyl-[acyl-carrier-protein] desaturase/ stearoyl-CoA 9-desaturase | 988 | 2e-107 |
| AT2G43710.2 SSI2; acyl-[acyl-carrier-protein] desaturase/ stearoyl-CoA 9-desaturase | 983 | 7e-107 |
| AT3G02630.1 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative | 723 | 1e-076 |
| AT5G16240.1 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative | 688 | 1e-072 |
| AT3G02610.1 acyl-[acyl-carrier-protein] desaturase/ oxidoreductase/ transition metal ion binding | 633 | 3e-066 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
