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Information for unigene UN14812

FASTA Sequence
Unigene ID: UN14812Length: 2199 SSR 
AAGCTCAGCTAGCTATGGCGTTTCTTCTCCCGAATCTCTCTCCTTCATTCCTTCTTCAAACAGGAAAATCCATCAAAGAGAAACCC
ATTTCCACCCATTCTCTATCCATCTCATCTTCTTCTTCTTCTTCTTCCAGTAGCTACAATTTCGAAGAAGATAGCCTCTCTCTGCT
AACTCTTCCCGTCCAGGCTCCTCCTGCTCCAGGTGCGCAGGTTAAGACCATGCCGAGTGGACAGGATAAGCACCAGCAGCATGGCA
AAGATGAGTTCTACATCAATCTCGGTCTAGCGATACGTACCCTTCGTGAAGATTTGCCTTTGCTCTTCACCAAAGATCTCAATTAT
GACATTTACAGGGATGATATAACATTGGTGGATCCAGTGAACACTTTCTCTGGGATTGAGAACTACAAACTCATCTTCTGGGCGCT
CAGGTTTCATGGCAAGATTCTCTTCAGAGATATCTCGCTTGAGATCTTCAGGGTTTGGCAACCATCAGAGAACATGATCCTCATCA
GGTGTAATCTCAAAGGTGTGCCTAGAGTCCCATGGGAGGCCAAAGGAGAGTTTCAGGGCACTTCTCGTTATAAACTAGACCGCAAT
GGGAAGATCTACGAGCATAAAGTCGATAACTTGGCTTTCTTTCCCTCACCAGCTCAAACCTGCCACTTCTGTGTTGGATTTGGTCA
CTGCTTGCCCTGCCAGTCCCAATCCAACATTCATGTTTGGCTCTTCATACTCGTCTTCTTGGATTGAGTTCTATCAAGCTGTGAGA
AATACACTAGACAAGCAACAAGAACAAATCCTTGTGCAAGACCGTTTTGTTATATGTTCATAAATCCATTGATTGGGTGGGTCACA
TTCAGCTATATATATACTGTTGCATCGAAGATGATATATACATATAATGTGCAGGCATATGTAGATGTGGTTGACTTATGGAAGCA
AACCTGTTTAACCCATGAGCTTGTACATTTTGCCTATCGAATGTAAACAGACTTCATTATAGTTATTATATGTTTGAACACTCTTA
AACAGAAGAAATTTTGAATAGAAGCCTATATATATGTTCAAAGTTTGGAGAAATCAAAAACAAATAACATTCTTTGCTCAAATAGA
AGATAGATATCCTTTACGGAGAGGTTGCAACAGCAATGAGGTCTCCAGAGGATTTGGCTTGGACCCATATGTCCGAGGAGGAGACC
TAGAGATTACTACACCTTCAATCCTAGTCGCGGTAAGGTGTGAGATCGATCTGGAACCGCTGCTTTCCTTTTGTGACCCTAGCAAT
CGTGATGAGCTCCTCTAGGAGTTCTTCTAGATGACGCAAAGGCCATTGGGTTGGACCATCAACTGGAGCACTTAGAGGATCATCAT
GAACCTCCATAAAAATTCCATCGACGCCAACGGCTACAGCTGTTCTGGCAATGCAGGGTATTAACTCCCGAAGGCCTCCACTAGCA
ACACCACCACCTTCCAACTTTTTGCCTGCAGGTTGTTGGAGTGCATGGGTTATATCAGCAACAACAGGACAATTAGCTTCCCTCAT
CCATTCAAAGTTTCGTGGATCTACTATCAAATCATTGTATCCAAACATGGTTCCTCTTTCACAAACCATCACATTCGGATTCCCAG
CCAGCCTGATCTTCTCAGCTGAATTTTCCATGACAGAAGGAGCACAGAACTGTCCTTTCTTAATATTGATAATTTTTCCAGTTTGG
GCTGCCGCAACCAGAAGATCTGTCTGGCGACATAAGAATGCTGGTATCTGAATTATATCAGCAACCTTGCCAACTTCTTCACACTG
ATACGCCTCATGAACATCAGTTACAATTGGTAAGTCATATGCTACTTTCACCTTCTCAAGAATCTTGAGACCCTCAGCCATGCCAG
GACCTCGGAAGGACTTAGAAGAAGTTCTGTTAGCCTTATCAAAACTCGACTTGAAAACCAGTGGCAACCCAACTTTTGTGGCAATG
TGTTTGATGTGTTTTGCCATTCGAAGAATATGCTCCTCGGATTCGATCACATTTGGACCAGCCAACAAGAAGAATGGTTCAGCATC
CTTAAGCTGATTGTAGAGTGGTGATGTTGCCGCCATTCTTCTCGGGAAAGCAAGAAAAGCTGTATAAGGTTTTAGCTTTTGATCTC
GAAGTTGCAGAGTGAGTGCGAGTGAAGGGAAGTGAGATCTCTTCTCACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002887789 predicted protein [Arabidopsis lyrata subsp. lyrata]14408e-157
NP_178068 2-dehydro-3-deoxyphosphooctonate aldolase [Arabidopsis thaliana]14362e-156
AAM47465 AT5g09730/F17I14_80 [Arabidopsis thaliana]14326e-156
BAB41014 2-dehydro-3-deoxyphosphooctonate aldolase [Arabidopsis thaliana]14301e-155
NP_173084 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [Arabidopsis thaliana]13555e-147

Swiss-Prot top hits (Blast detail)Scoree value
Q9AV97 2-dehydro-3-deoxyphosphooctonate aldolase14369e-158
O50044 2-dehydro-3-deoxyphosphooctonate aldolase13401e-146
B7J6R3 2-dehydro-3-deoxyphosphooctonate aldolase7064e-073
B5EPM6 2-dehydro-3-deoxyphosphooctonate aldolase7064e-073
Q8RE91 2-dehydro-3-deoxyphosphooctonate aldolase6958e-072

TrEMBL top hits (Blast detail)Scoree value
B9DG45 AT1G79500 protein14361e-156
Q6NQL4 At1g1634013554e-147
A9PC43 Predicted protein13412e-145
C6TEV7 Putative uncharacterized protein13383e-145
B9H7Y4 Predicted protein13303e-144

Arabidopsis top hits (Blast detail)Scoree value
AT1G79500.1 2-dehydro-3-deoxyphosphooctonate aldolase / phospho-2-dehydro-3-deoxyoctonate aldolase / 3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase (KDSA)14376e-159
AT1G79500.2 2-dehydro-3-deoxyphosphooctonate aldolase / phospho-2-dehydro-3-deoxyoctonate aldolase / 3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase (KDSA)14376e-159
AT1G79500.3 2-dehydro-3-deoxyphosphooctonate aldolase / phospho-2-dehydro-3-deoxyoctonate aldolase / 3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase (KDSA)14376e-159
AT1G79500.4 2-dehydro-3-deoxyphosphooctonate aldolase / phospho-2-dehydro-3-deoxyoctonate aldolase / 3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase (KDSA)14376e-159
AT1G16340.1 ATKDSA2; 3-deoxy-8-phosphooctulonate synthase13561e-149

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  25%
 
112  25%
 
103  38%
 
81  13%

Unigene MembersMember information