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Information for unigene UN14828
| FASTA Sequence |
| Unigene ID: UN14828 | Length: 906 |
SSR | SNP | GGGGAGAGAGAGTTAAAGATCTACGAAAGGAAGAAGAAGAAGAAGAAGATGGAGAGCAGACAAGCGAAGAGGATCTCGAAGATCAA
TGTCTTTGTATTGGTCGGTCTGATACTATTGAATTCAATCAATCCAATCTCCTCGCTCTCGGTTACAGTCGAGGAAGATGAATGCG
TCCAAGAGTACGTCCTCTACGAAGGAGACACCGTCTCTGGAAACTTCGTCGTCGTCGACCATGATGTCTTCTGGGGACCGGATCAT
ACCGGTATTGATTTCACGGTGACGTCACCAGCTGGGAACATTGTACAGACGTTGAAGGGGACATCAGGAGATAAGTTTGAGTTCAA
GGCACCGAGGAGTGGGATGTACAAGTTTTGTTTCCACAACCCTTACTCTGCTCCTGAGACTGTCTCCTTCTATATTCACGTTGGTC
ATATCCCTAACGAGCATGACTTAGCCAAAGACGAACATTTGGACCCGGTGAATGTTAAGATAGCTGAGCTGAGAGAGTCTTTGGAA
TCTGTTGTTGCTGAGCAGAAGTATCTTAAAGCACGTGATACCCGTCACCGTCATACTAATGAGAGCACGAGAAAGCGAGTGATATT
CTACACAGTAGGAGAGTACATTTTCCTTGCAGCAGCAAGTGGTCTTCAGATTCTCTACATCCGCAAGCTCTTCAGCAAGTCTGTTG
CATACAACAGAGTTTGAACATAATTGAAACCCCCACGACATCGTTTTGTCTCTTTTTTTTTAATGTTTTGAATTGGTAACACACCA
TCTTTTGAAAATGTTAGTTAATTAAGACCTTAACATCGAAAGACCCTTTTTGTTTTTGTTTTCGGTATCTACATTTTTCATTAACT
TCAGTTTTGTTTATGTTTTAACAATGGAGAACTTGATATGCTTACA
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_188924 emp24/gp25L/p24 family/GOLD domain-containing protein [Arabidopsis thaliana] | 1033 | 3e-110 |
| XP_002883380 hypothetical protein ARALYDRAFT_479795 [Arabidopsis lyrata subsp. lyrata] | 1030 | 8e-110 |
| XP_002283487 PREDICTED: hypothetical protein [Vitis vinifera] | 893 | 6e-094 |
| XP_002517064 coated vesicle membrane protein, putative [Ricinus communis] | 874 | 9e-092 |
| XP_002315749 predicted protein [Populus trichocarpa] | 871 | 2e-091 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q769F9 Transmembrane emp24 domain-containing protein A | 231 | 2e-018 |
| Q5E971 Transmembrane emp24 domain-containing protein 10 | 184 | 4e-013 |
| Q28735 Transmembrane emp24 domain-containing protein 10 | 184 | 4e-013 |
| O35587 Transmembrane protein Tmp21 | 181 | 1e-012 |
| Q63584 Transmembrane emp24 domain-containing protein 10 | 181 | 1e-012 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LIL4 AT3g22845/MWI23_22 | 1033 | 2e-110 |
| B9RTJ5 Coated vesicle membrane protein, putative | 874 | 6e-092 |
| B9HUQ9 Predicted protein | 871 | 1e-091 |
| C6T0D5 Putative uncharacterized protein | 860 | 3e-090 |
| C6SVC0 Putative uncharacterized protein | 858 | 5e-090 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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