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Information for unigene UN14849

FASTA Sequence
Unigene ID: UN14849Length: 1088 SSR 
AAACTAGGAATTAAACACAGATGGGGAGCGTAAGAATACAACCACCGTCTTCTTCATCGACACATCTTATCCACAACCTTCTCCGA
CATCCCGAACCACCGTCTTCCTTCGGTGTCTTCATCAGACCCTTTCGCTTCTCCGCTATAACATGTCAATCCAGCCGCGGTAACAA
GCCTCGCTTTCAATCAATCTCTTCAAAGCTTCCGCTTCCTTTCCACTCTACTTCTTCTTCTTCTTCACTCGTAGCGAAATCCTTCT
CTGCCATCGATGAGCCGGACCTCCTCGGAGAAGAAGATGAGAGCGAGGAAGACGATTACAACGAAGAAAAAGACGAAGAAGAAGAG
CTGGACAGTGGAATGGTATCCGCGAGAGGAAGTGAGGAGGACTACGAGGAAGGTTTAGGAGACAAGGAGGAGGAGGATAAGATAGA
GAAGATGAAGAAGAAGGCTCGGGGCTCCGGTTTGAAGTTGACTATTAAGGAGAAGAAGGAACTTGCTTCATACGCCCATAGTCTTG
GTGACAAATTGAAATGTCAACTCGTCGGCAAATCTGGCGTTACTGATTCGGTGGTTTTCTCATTCCTCGAGACTCTCGAGAAGAAC
GAGCTCTTAAAGGTGAAGATACGGAAGACATCTCCAGAGGAGATGGAGGACGCTGTTAGGCATTTGGAGGAAGCCACTGGTTCTGT
TGCTGTTGGCCAAATCGGGAGGACGGTTATATTGTACCGGCCTAGTCCCACCAAAATGAAAGCTGAGGAGAAGAAGAAAGAAGTTG
AGAGATTGTTGATTAGAAGGAGACAGAAGTTCTCAAACTCCCGACCCACTAGACCTTTTAGGAGAGAGTATTCAGAGAGACCTGAT
GGACGTGGACGCAGAGGAGGAAGTAGAGTTGCAACCCCTTGATTTTTTTGTTATTGTTAATTTGCTCTGTTTTTTTTTTTTATTAT
CACCTAAGAAGACCAGTTCTTTGCTTTTGTATGCATTCTTCAAAAAAATACAATCTCGATCTGTAAACCCTCCATTGCTGGGAAGC
TGTAACCATTTGTGGCCATGAAATGACGTGAAGAGTTAAAGACAATCTTAACTCTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_195615 putative RNA-binding protein containing KH domain protein [Arabidopsis thaliana]10147e-108
XP_002868881 hypothetical protein ARALYDRAFT_490673 [Arabidopsis lyrata subsp. lyrata]9923e-105
NP_849521 putative RNA-binding protein containing KH domain protein [Arabidopsis thaliana]9143e-096
XP_002265886 PREDICTED: hypothetical protein [Vitis vinifera]4896e-047
XP_002512975 hypothetical protein RCOM_1449540 [Ricinus communis]4449e-042

Swiss-Prot top hits (Blast detail)Scoree value
P0AGK6 RNA-binding protein yhbY1254e-006
P0AGK5 RNA-binding protein yhbY1254e-006
P0AGK4 RNA-binding protein yhbY1254e-006
P0AGK7 RNA-binding protein yhbY1254e-006

TrEMBL top hits (Blast detail)Scoree value
Q9SVI9 At4g3904010145e-108
Q3E9N8 Putative uncharacterized protein At4g39040.29142e-096
B9RHB6 Putative uncharacterized protein4446e-042
C6TB79 Putative uncharacterized protein4204e-039
Q9SJU2 Putative uncharacterized protein At2g213504123e-038

Arabidopsis top hits (Blast detail)Scoree value
AT4G39040.1 RNA binding10143e-110
AT4G39040.2 RNA binding9141e-098
AT2G21350.1 RNA binding4247e-042

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
84  44%
 
94  44%
 
71  11%

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