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Information for unigene UN14855
| FASTA Sequence |
| Unigene ID: UN14855 | Length: 1812 |
SSR | | GGGAGCGAGAGAACACCTTATCGGAGATAAAGTGTCGTTGACAAACAAAATCGAGACTTCTCCTTCCTCGCGGGCGATCGCCATGG
ATTTATCTCTTCTCCGTCCGCAGCCGTTTCTATCTCCGTTCTCAAATCCATTTCCTCGCTCGCGTCCTTACTACAAGCCTCTCAAC
CTCCGATGTTCCGTATCCGGCGGATCCGTCGTCGGCTCTTCTACAATCGAAGGCGGAGGAGGAGGAGGAGGTAAAACTGTTACGGC
GGACTGCGTGATCGTCGGCGGAGGGATCAGCGGCCTGTGCATTGCGCAGGCGCTCGTGACGAAGCACCCGGACGCAGCGAAGAATG
TGATAGTGACGGAGGCGAAGGACCGAGTTGGAGGGAATATCATCACGCGGGAGGAGCAAGGTTTTCTGTGGGAGGAAGGTCCCAAT
AGCTTCCAGCCGTCTGATCCTATGCTCACTATGGTGGTGGATAGTGGTTTGAAGGATGATTTAGTGTTGGGAGATCCTACTGCTCC
GAGGTTTGTGTTGTGGAATGGGAAGCTGAGGCCGGTTCCGTCAAAGCTAACGGACTTGCCTTTCTTTGACTTGATGAGCATTGGAG
GAAAGATTAGAGCTGGTTTTGGTGCCATTGGCATTCGACCTTCTCCCCCGGGTCGTGAGGAATCTGTGGAAGAGTTTGTAAGGCGT
AACCTTGGTGATGAGGTTTTTGAGCGCTTGATTGAACCTTTTTGTTCAGGTGTTTATGCGGGAGATCCTGCGAAACTGAGTATGAA
AGCAGCTTTTGGGAAGGTTTGGAAGCTAGAGGAGAATGGTGGAAGCATCATAGGTGGTGCTTTTAAGGCAATTCAAGCGAGAAATA
ATGCTCCCAAGACTACCCGTGACTCGCGCCTGCCAAAGCCAAAGGGCCAAACTGTTGGTTCTTTCAGGAAAGGACTCACTATGCTG
CCAGAGGCAATCTCTGCAAGGTTGGGTAACAAGGTGAAAGTTTCTTGGAAGCTCTCAAGTATTACTAAGCTGGCAAGCGGAGAATA
TAGCTTAACTTACGAAACTCCGGAGGGGATAGTCACTGTACAGAGCAAAAGTATAGTGATGACTGTGCCATCTCATGTTGCTAGTA
GTCTCTTGCGCCCTCTTTCTGATTCTGCAGCTGAAGCGCTCTCAAAACTCTACTATCCGCCGGTTGCAGCAGTATCTATCTCATAC
CCCAAAGAAGCAATCCGTAGCGAATGCTTAATAGATGGTGAACTAAAAGGGTTCGGCCAGTTGCATCCACGCACGCAAAAAGTGGA
AACTCTTGGAACAATATACAGTTCGTCACTCTTTCCTAACCGAGCGCCACCTGGAAGAGTGTTGCTATTGAACTACATCGGTGGAG
CTACCAACACTGGGATCTTATCAAAGTCAGAAGGTGAGTTAGTGGAAGTAGTGGATAGAGACTTGAGGAAGATGCTGATAAAGCCA
AGCTCGACCGATCCACTTGTACTTGGAGTAAGAGTATGGCCTCAAGCCATTCCTCAGTTCCTGATAGTCACATTGATTTGGTAGAC
GCAGCGAAAGCATCTCTCTCGTCATCTGGTCATGAGGCATATTCTTGGGTGGAAATACGTTGCTGGTGTAGCATTGGGTCGGTGTG
TGGAAGTGCTTATGAAACCGCGACTCAGTGACGATTTCATGTCGAGTACACTTACAAGTAATGTAACCATTACGCAACAACGATTT
GACTAGATTGCAGTTTTGACTTTAAGAACACTCTGTTTGTGAAAAAGACAAGTCTATGATTGAGTAAATTTATATGTATAATGTAT
TACTAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_192078 protoporphyrinogen oxidase [Arabidopsis thaliana] | 2200 | 4e-245 |
| AAK62389 Unknown protein [Arabidopsis thaliana] | 2187 | 1e-243 |
| XP_002874964 hypothetical protein ARALYDRAFT_912062 [Arabidopsis lyrata subsp. lyrata] | 2182 | 5e-243 |
| BAJ34545 unnamed protein product [Thellungiella halophila] | 2155 | 7e-240 |
| NP_849283 protoporphyrinogen oxidase [Arabidopsis thaliana] | 1988 | 2e-220 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P55826 Protoporphyrinogen oxidase, chloroplastic | 2207 | 3e-247 |
| O24163 Protoporphyrinogen oxidase, chloroplastic | 1839 | 1e-204 |
| Q9AR38 Protoporphyrinogen oxidase, chloroplastic | 1780 | 9e-198 |
| P56601 Protoporphyrinogen oxidase | 485 | 1e-047 |
| P32397 Protoporphyrinogen oxidase | 340 | 9e-031 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q5M730 At4g01690 | 2200 | 3e-245 |
| Q3EAD4 Putative uncharacterized protein At4g01690.2 | 1988 | 1e-220 |
| B9GTA7 Predicted protein | 1925 | 2e-213 |
| B9RN34 Protoporphyrinogen oxidase, chloroplast, putative | 1920 | 9e-213 |
| B9I9A1 Predicted protein | 1911 | 1e-211 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G01690.1 PPOX; protoporphyrinogen oxidase | 2207 | 2e-248 |
| AT4G01690.2 PPOX; protoporphyrinogen oxidase | 1995 | 9e-224 |
| AT5G14220.1 HEMG2; electron carrier/ oxidoreductase/ protoporphyrinogen oxidase | 282 | 4e-025 |
| AT1G02350.1 protoporphyrinogen oxidase-related | 115 | 9e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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