Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN14859

FASTA Sequence
Unigene ID: UN14859Length: 1032 SSR 
GGTGTGATTGAACTTGTCATTTCATAAAATATTCTTAAATCCACAGTTATTGAACAAAATTAAAATGGAAGATTTTAGAATATTTT
AGTTGTTCTTTTTAGAGTGTTTAATCATTTCCATATGTTCAATCTTCTGATTATCCATTTAGCAAATAGAAAATTGAACTGGTTGG
ACAAACAAACTCGATCTCAAAAGCTTTTAAGAAGAAGAAGAAGAGGAACTCAGCATCCTCTGTTTGATCCATGACTCCAGATACCG
AAGCTCATTATTACTAATCGAGTGTCCAAGATCTGGATATGCCTTAAATTCACAAGTGACACCAGCTTGTTGAAGGAAAGGAAGAG
CTGCTTGACCAGCTTCGAATAGTACAGTCTTGTCATCAATCCCATGAGACCACAAGATTGGCGTCTTGATAGCATCTTTGGTAAAC
TGATTGATGACAGAAGAATTGAATGGAACCCATCCACTAAAGACTGCACCTCCTCCAAGAGTTTTAGGGTAAAGCAGAGCACTAGC
CAAGGTTAATGCCCCTCCTTGGCTAAATCCACAGATATACACGTTTTCTGGCTTGATTCCTCCTGCAATCTCCTTATCTATAACAG
CATGAACGTTCTTAACTGCTTCAAGCACACTGCTTTCATCATTTGGAGAGGCCGCGGTAAGAGGAAGCTCACGGATGTCAAACCAA
GAAGGCATCACCATACCATGATTGCAGGAGACTGGATTCGGAGGAGCGGATGGGAAGAGCCATTTGGTGTTGCTAAACTCGGGAGA
CTTGAAAAGTGTCTTGATGGGTTCGTTGGCAGGTCCGGAATCTCCAAGCCCGTGAAGCCACAAGATGAAGGTTCTTCGAGCCATGG
AGTCTGAAGAAGAGGGAGATGATGATGATGAGTAAGGCTTGTCTTCGAAGAAGAATGCGAAGAAGAGGACGGTGCTCAACAGTGAG
ATCGAGAAGAGAACGATCGGTTTCGTCAATGTGCTTGTTCGCATGTCAATATCGATCCTGCCATCACCATTTTACTCGGGAGACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_193961 carboxylesterase [Arabidopsis thaliana]11402e-122
XP_002867777 carboxylic ester hydrolase [Arabidopsis lyrata subsp. lyrata]11284e-121
ABO26814 SOBER1-like protein [Arabidopsis thaliana]10309e-110
CAA16780 putative protein [Arabidopsis thaliana]10066e-107
CBI33233 unnamed protein product [Vitis vinifera]9393e-099

Swiss-Prot top hits (Blast detail)Scoree value
Q5KFA4 Acyl-protein thioesterase 13612e-033
Q6CGL4 Acyl-protein thioesterase 13092e-027
Q6FW75 Acyl-protein thioesterase 13021e-026
Q4I8Q4 Acyl-protein thioesterase 12903e-025
Q6CJK6 Acyl-protein thioesterase 12885e-025

TrEMBL top hits (Blast detail)Scoree value
Q8GYK2 Putative uncharacterized protein At4g22300/T10I14_13011401e-122
A4KWB1 SOBER1-like protein10307e-110
O49635 Putative uncharacterized protein AT4g2230010064e-107
B9HZJ0 Predicted protein9251e-097
B9RXD5 Acyl-protein thioesterase 1,2, putative9025e-095

Arabidopsis top hits (Blast detail)Scoree value
AT4G22300.1 SOBER1 (SUPPRESSOR OF AVRBST-ELICITED RESISTANCE 1); carboxylesterase11442e-125
AT5G20060.2 phospholipase/carboxylesterase family protein2088e-017
AT5G20060.1 phospholipase/carboxylesterase family protein2088e-017
AT5G20060.3 phospholipase/carboxylesterase family protein2088e-017
AT1G18773.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: SOBER1 (SUPPRESSOR OF AVRBST-ELICITED RESISTANCE 1); carboxylesterase (TAIR:AT4G22300.1); Has 30 Blast hits to 26 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1711e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
126  60%
 
102  20%
 
92  20%

Unigene MembersMember information